Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5 480 1e-130 seq3 185 1e-41 seq1 100 4e-16 >seq5 Length=3814559 Score = 480 bits (532), Expect = 1e-130 Identities = 797/1141 (70%), Gaps = 16/1141 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| ||||| |||||||||||||| Sbjct 3177896 TCACCGGACAGGATAGCAGCCTGGACGGCGGCACCGTAGGCGACGGCCTCATCGGGGTTG 3177955 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || | || || ||||| || | || || | | | || ||| | ||| Sbjct 3177956 ATCGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACAAGCTTCTGGATTCTGGGG 3178015 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || ||||| |||||||| ||||| || | || || || |||||||| | Sbjct 3178016 ATACGGGTGGATCCTCCGACCAAGACGATCTCGTGAACCGAGGACTTGTCGATCTTGGCA 3178075 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGT 7246 || || || |||||||| |||| || || ||||| | ||| ||||| Sbjct 3178076 TCGCGGAGGACACGCTCGACAGGCTCCATGGTAGAT---CGGAAGAGATCCTGGCACAGC 3178132 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| || || || ||||| ||||| || ||||| || | || || || | || || Sbjct 3178133 TCCTCGAATCGGGCGCGGGTGATGGAGGTGTAGAAGTCGATACCCTCATAGAGAGAGTCG 3178192 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 ||||| |||| || || || | |||||| | || ||||| || |||||||| || || Sbjct 3178193 ATTTCGATGGAAGTCTGCGCGGACGAAGACAGGGTGCGCTTGGCTCGCTCACAGGCGGTC 3178252 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| ||||| ||||| | ||| | | || ||||| || |||||||| ||| Sbjct 3178253 CGGAGACGTCGAAGAGCACGGGCGTTGGTGCTGAGGTCCTTCTTGTGCTTACGTTTGAAC 3178312 Query 7427 TCTTCAGA-GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 || ||| |||||| | |||||| |||||||| |||||||||||||| || || Sbjct 3178313 TC-AGAGACGAAGTGATTGACGAGTCTGTTGTCGAAATCCTCACCACCCAAGTGAGTGTC 3178371 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || ||||||| ||||||||||| || ||| |||| ||| | || | || ||||| || Sbjct 3178372 ACCGGCGGTCGACTTGACTTCAAAAATTCCTTCTTCGATGGTCAAGAGGGAGACATCGAA 3178431 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAG 7605 ||||||||||| || || || ||||| ||||| ||| | |||| ||||| ||||| Sbjct 3178432 GGTACCACCACCAAGATCGAAGATGAGAACGTTGCGCTCGCCCTCTTCTTTCTTGTCGAG 3178491 Query 7606 ACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAG 7664 ||| || ||||| || || || || || || || || |||| || |||| || ||||||| Sbjct 3178492 ACCATAGGCGATGGCTGCGGCGGTCGGCTCGTTGATGATACGGAGGACA-TTGAGGCCAG 3178550 Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724 | || | |||||||| || ||||| || || |||||||| |||||||| ||||| | Sbjct 3178551 CGATCAGACCGGCATCTTTGGTAGCTTGACGCTGAGAATCGTTGAAGTAGGCGGGGACAG 3178610 Query 7725 TTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGG 7784 | ||||| |||| ||||| | ||| ||||| || || ||| | ||| ||| |||| Sbjct 3178611 TGACGACAGCGTTGTTGACTGTGCCACCAAGATATGACTCTGCGGTCTCTCGCATCTTGG 3178670 Query 7785 TAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAA 7844 | | ||||| ||||| |||||||| | | |||||| || | || || || || || | Sbjct 3178671 TCAAGACCATGGATGAGATCTCTTCGGGGGTAAACTGCTTGTTCTCTCCCTTGAACTCCA 3178730 Query 7845 CTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT 7904 | || || | ||| || ||| || | | | ||| | | ||| ||||| | Sbjct 3178731 CCTCGATGACGGGCTT-GCCG--GCCTTGTCAACGATCTTGAAGGGGAAATGCTTCATGT 3178787 Query 7905 CGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTG 7964 || | ||||||| || | || || | ||||| || ||||| || || || || | Sbjct 3178788 CGGCCTGGACCTCAGCATCGGCGAATTTGCGACCGATCAGTCGCTTGGCGTCGAAGACAG 3178847 Query 7965 TGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTAT 8024 |||| | ||||||||||| |||||||| || || || ||||| || || || Sbjct 3178848 TGTTCTGAGGGTTCATGGCGACCTGGTTCTTTGCGGCATCACCGATCAGGCGCTC---GG 3178904 Query 8025 TTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTT 8084 | || || || || || | || ||||| ||||| || || |||||||| || ||||| | Sbjct 3178905 TGTCTGTGAAAGCCACAAAGGACGGGGTGGTTCGGTTGCCCTGGTCGTTGGCGATAATCT 3178964 Query 8085 CTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 | | ||||| | | | ||| |||||| ||||| || || || || | ||| ||||| | Sbjct 3178965 CGATACGGTCATCTCGGAAGATGCCGACACACGAGTAGGTCGTGCCCAGATCGATACCTA 3179024 Query 8145 T 8145 | Sbjct 3179025 T 3179025 >seq3 Length=4818847 Score = 185 bits (204), Expect = 1e-41 Identities = 352/514 (68%), Gaps = 7/514 (1%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| || | | ||| || |||||||| | | ||| Sbjct 1652327 AGGTCCTCGAAACGGGCACGGGTGATCTGGGCGTTGAAGTCCTCGCCGTCGAAGAGCGAG 1652268 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| || | ||| || || | |||| | ||| | || ||||| || ||||| || | Sbjct 1652267 TCAATCTCGACGGTGGTCTGGGTTCCGTTGGAGAGA--GTGCGCTTGGCACGCTCGCAGG 1652210 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | || || ||||| || | || ||||| | || ||||| || || Sbjct 1652209 CGGTACGGAGTCGTCGCAGGGCGCGAGCGTCTCCGGAGAGGTCCTTCTTGGTCTTGCGGG 1652150 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 | || || | |||||| |||||| | | |||||||| | ||||||||||| | Sbjct 1652149 TGAATTCCTTCTTGAAGTGGTCAAGGAGGTTGGTGTCGAAATCCTGTCCACCCAAGTGGG 1652090 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || ||||| || ||||| |||| ||| || | ||||| | || || |||| Sbjct 1652089 TGTCACCTGCGGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGACAT 1652030 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC--TTTGTTCTT 7599 | || ||||||||||| || || | ||||| || || || | || | | | Sbjct 1652029 CGAAAGTACCACCACCGAGATCGTAGATGAGGACATTGCGCTCCTTCTCAGATCGGCCAG 1651970 Query 7600 AT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 || |||||||||| || || ||||| || || || || || || ||||| ||| ||| | Sbjct 1651969 ATCCGAGACCGTAAGCAATGGCCGCAGCAGTAGGCTCGTTGATGATACGGAGAACGTTGA 1651910 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||| ||||| | | ||||| || || |||||||| || ||||| || ||||||| Sbjct 1651909 GGCCGGCAATGGCACCAGCATCCTTGGTGGCTTGTCGCTGGTTGTCGTTGAAATAGGCCG 1651850 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 |||| || || || || | | ||| ||||| || Sbjct 1651849 GGACGGTGACCACAGCCTTGGAGACCTTCTTTCC 1651816 >seq1 Length=6490813 Score = 100 bits (110), Expect = 4e-16 Identities = 223/329 (68%), Gaps = 12/329 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||| || || || || ||| | |||||||||||| || Sbjct 3301805 TCGAAATCCTCACCACCCAGATGGGTGTCACCGTTGGTAGACTTGACTTCAAAG--ACGC 3301862 Query 7517 CCTTC--AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 ||||| || | | | || | ||| || ||||| |||||||| || | || Sbjct 3301863 CCTTCTGGATCTCCAGGATGGAGATATCGAAGGTACCGCCACCCAGATCGTA---GACCG 3301919 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | | || ||| | ||| |||||||| || |||| || || || || |||| Sbjct 3301920 CGATGATGCGATCCTCT---TCCTTCTCGAGACCATAGGCGAGTGCAGCTGCGGTGGGTT 3301976 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGT 7693 | || | | ||| || ||| || || ||||| | ||| ||||| || || || ||| Sbjct 3301977 CGTTGACGACACGGAGGACGTTAAGACCGGCAAT-CTGGCCAGCATCCTTGGTGGCCTGT 3302035 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 |||||| ||||| |||||||| ||||| || ||||| ||| | |||| ||| || Sbjct 3302036 CGTTGCATGTCGTTGAAGTAGGCAGGGACGGTGACGACGCCGTTCTTGACGGGCTTGCCA 3302095 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 || || | ||| || | || ||||| || Sbjct 3302096 AGGTATGCTTCGGCAGTCTCCTTCATCTT 3302124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132704730080