Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq5 480 1e-130
seq3 185 1e-41
seq1 100 4e-16
>seq5
Length=3814559
Score = 480 bits (532), Expect = 1e-130
Identities = 797/1141 (70%), Gaps = 16/1141 (1%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | | ||| || || ||||| | || ||||| ||||| ||||||||||||||
Sbjct 3177896 TCACCGGACAGGATAGCAGCCTGGACGGCGGCACCGTAGGCGACGGCCTCATCGGGGTTG 3177955
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|||| || || | || || ||||| || | || || | | | || ||| | |||
Sbjct 3177956 ATCGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACAAGCTTCTGGATTCTGGGG 3178015
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || ||||| |||||||| ||||| || | || || || |||||||| |
Sbjct 3178016 ATACGGGTGGATCCTCCGACCAAGACGATCTCGTGAACCGAGGACTTGTCGATCTTGGCA 3178075
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGT 7246
|| || || |||||||| |||| || || ||||| | ||| |||||
Sbjct 3178076 TCGCGGAGGACACGCTCGACAGGCTCCATGGTAGAT---CGGAAGAGATCCTGGCACAGC 3178132
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
||||| || || || ||||| ||||| || ||||| || | || || || | || ||
Sbjct 3178133 TCCTCGAATCGGGCGCGGGTGATGGAGGTGTAGAAGTCGATACCCTCATAGAGAGAGTCG 3178192
Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366
||||| |||| || || || | |||||| | || ||||| || |||||||| || ||
Sbjct 3178193 ATTTCGATGGAAGTCTGCGCGGACGAAGACAGGGTGCGCTTGGCTCGCTCACAGGCGGTC 3178252
Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426
|| | ||| ||||| ||||| | ||| | | || ||||| || |||||||| |||
Sbjct 3178253 CGGAGACGTCGAAGAGCACGGGCGTTGGTGCTGAGGTCCTTCTTGTGCTTACGTTTGAAC 3178312
Query 7427 TCTTCAGA-GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485
|| ||| |||||| | |||||| |||||||| |||||||||||||| || ||
Sbjct 3178313 TC-AGAGACGAAGTGATTGACGAGTCTGTTGTCGAAATCCTCACCACCCAAGTGAGTGTC 3178371
Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545
|| ||||||| ||||||||||| || ||| |||| ||| | || | || ||||| ||
Sbjct 3178372 ACCGGCGGTCGACTTGACTTCAAAAATTCCTTCTTCGATGGTCAAGAGGGAGACATCGAA 3178431
Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAG 7605
||||||||||| || || || ||||| ||||| ||| | |||| ||||| |||||
Sbjct 3178432 GGTACCACCACCAAGATCGAAGATGAGAACGTTGCGCTCGCCCTCTTCTTTCTTGTCGAG 3178491
Query 7606 ACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAG 7664
||| || ||||| || || || || || || || || |||| || |||| || |||||||
Sbjct 3178492 ACCATAGGCGATGGCTGCGGCGGTCGGCTCGTTGATGATACGGAGGACA-TTGAGGCCAG 3178550
Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724
| || | |||||||| || ||||| || || |||||||| |||||||| ||||| |
Sbjct 3178551 CGATCAGACCGGCATCTTTGGTAGCTTGACGCTGAGAATCGTTGAAGTAGGCGGGGACAG 3178610
Query 7725 TTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGG 7784
| ||||| |||| ||||| | ||| ||||| || || ||| | ||| ||| ||||
Sbjct 3178611 TGACGACAGCGTTGTTGACTGTGCCACCAAGATATGACTCTGCGGTCTCTCGCATCTTGG 3178670
Query 7785 TAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAA 7844
| | ||||| ||||| |||||||| | | |||||| || | || || || || || |
Sbjct 3178671 TCAAGACCATGGATGAGATCTCTTCGGGGGTAAACTGCTTGTTCTCTCCCTTGAACTCCA 3178730
Query 7845 CTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT 7904
| || || | ||| || ||| || | | | ||| | | ||| ||||| |
Sbjct 3178731 CCTCGATGACGGGCTT-GCCG--GCCTTGTCAACGATCTTGAAGGGGAAATGCTTCATGT 3178787
Query 7905 CGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTG 7964
|| | ||||||| || | || || | ||||| || ||||| || || || || |
Sbjct 3178788 CGGCCTGGACCTCAGCATCGGCGAATTTGCGACCGATCAGTCGCTTGGCGTCGAAGACAG 3178847
Query 7965 TGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTAT 8024
|||| | ||||||||||| |||||||| || || || ||||| || || ||
Sbjct 3178848 TGTTCTGAGGGTTCATGGCGACCTGGTTCTTTGCGGCATCACCGATCAGGCGCTC---GG 3178904
Query 8025 TTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTT 8084
| || || || || || | || ||||| ||||| || || |||||||| || ||||| |
Sbjct 3178905 TGTCTGTGAAAGCCACAAAGGACGGGGTGGTTCGGTTGCCCTGGTCGTTGGCGATAATCT 3178964
Query 8085 CTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144
| | ||||| | | | ||| |||||| ||||| || || || || | ||| ||||| |
Sbjct 3178965 CGATACGGTCATCTCGGAAGATGCCGACACACGAGTAGGTCGTGCCCAGATCGATACCTA 3179024
Query 8145 T 8145
|
Sbjct 3179025 T 3179025
>seq3
Length=4818847
Score = 185 bits (204), Expect = 1e-41
Identities = 352/514 (68%), Gaps = 7/514 (1%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| || | | ||| || |||||||| | | |||
Sbjct 1652327 AGGTCCTCGAAACGGGCACGGGTGATCTGGGCGTTGAAGTCCTCGCCGTCGAAGAGCGAG 1652268
Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| || | ||| || || | |||| | ||| | || ||||| || ||||| || |
Sbjct 1652267 TCAATCTCGACGGTGGTCTGGGTTCCGTTGGAGAGA--GTGCGCTTGGCACGCTCGCAGG 1652210
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| || || | || || ||||| || | || ||||| | || ||||| || ||
Sbjct 1652209 CGGTACGGAGTCGTCGCAGGGCGCGAGCGTCTCCGGAGAGGTCCTTCTTGGTCTTGCGGG 1652150
Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
| || || | |||||| |||||| | | |||||||| | ||||||||||| |
Sbjct 1652149 TGAATTCCTTCTTGAAGTGGTCAAGGAGGTTGGTGTCGAAATCCTGTCCACCCAAGTGGG 1652090
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || ||||| || ||||| |||| ||| || | ||||| | || || ||||
Sbjct 1652089 TGTCACCTGCGGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGACAT 1652030
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC--TTTGTTCTT 7599
| || ||||||||||| || || | ||||| || || || | || | | |
Sbjct 1652029 CGAAAGTACCACCACCGAGATCGTAGATGAGGACATTGCGCTCCTTCTCAGATCGGCCAG 1651970
Query 7600 AT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
|| |||||||||| || || ||||| || || || || || || ||||| ||| ||| |
Sbjct 1651969 ATCCGAGACCGTAAGCAATGGCCGCAGCAGTAGGCTCGTTGATGATACGGAGAACGTTGA 1651910
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||| ||||| | | ||||| || || |||||||| || ||||| || |||||||
Sbjct 1651909 GGCCGGCAATGGCACCAGCATCCTTGGTGGCTTGTCGCTGGTTGTCGTTGAAATAGGCCG 1651850
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
|||| || || || || | | ||| ||||| ||
Sbjct 1651849 GGACGGTGACCACAGCCTTGGAGACCTTCTTTCC 1651816
>seq1
Length=6490813
Score = 100 bits (110), Expect = 4e-16
Identities = 223/329 (68%), Gaps = 12/329 (4%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||| || || || || ||| | |||||||||||| ||
Sbjct 3301805 TCGAAATCCTCACCACCCAGATGGGTGTCACCGTTGGTAGACTTGACTTCAAAG--ACGC 3301862
Query 7517 CCTTC--AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574
||||| || | | | || | ||| || ||||| |||||||| || | ||
Sbjct 3301863 CCTTCTGGATCTCCAGGATGGAGATATCGAAGGTACCGCCACCCAGATCGTA---GACCG 3301919
Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| | | || ||| | ||| |||||||| || |||| || || || || ||||
Sbjct 3301920 CGATGATGCGATCCTCT---TCCTTCTCGAGACCATAGGCGAGTGCAGCTGCGGTGGGTT 3301976
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGT 7693
| || | | ||| || ||| || || ||||| | ||| ||||| || || || |||
Sbjct 3301977 CGTTGACGACACGGAGGACGTTAAGACCGGCAAT-CTGGCCAGCATCCTTGGTGGCCTGT 3302035
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|||||| ||||| |||||||| ||||| || ||||| ||| | |||| ||| ||
Sbjct 3302036 CGTTGCATGTCGTTGAAGTAGGCAGGGACGGTGACGACGCCGTTCTTGACGGGCTTGCCA 3302095
Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782
|| || | ||| || | || ||||| ||
Sbjct 3302096 AGGTATGCTTCGGCAGTCTCCTTCATCTT 3302124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132704730080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |