Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 134 3e-26 seq5 86.0 1e-11 >seq3 Length=4818847 Score = 134 bits (148), Expect = 3e-26 Identities = 140/182 (77%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| ||| || || | ||||||||||| || Sbjct 1796614 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGTTG 1796673 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||||||||||||||| || || ||||| |||||||||||||| ||||| ||||| || Sbjct 1796674 TTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTT 1796733 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||||||||| || ||||| | | | || || || || ||||| | |||||||| Sbjct 1796734 CGACTTGACGTTGTCGATGGTATCGCTGGAC--TCAACCTCGAGGGTGATGGTCTTTCCC 1796791 Query 195115 GT 195116 || Sbjct 1796792 GT 1796793 Score = 122 bits (134), Expect = 2e-22 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 || || |||||||| || || || || || ||||| ||| |||| || | ||||| || Sbjct 1796381 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAG-GTGCGGCCATCCTC 1796439 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || ||||||||||| ||||| ||||| || ||||||||||| ||||| || Sbjct 1796440 AAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTG 1796499 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| || ||||| | | | || || || ||||| || | ||| Sbjct 1796500 GATCTTGGACTTGACGTTGTCGATGGTATCGCTGGAC--TCGACCTCAAGAGTGATGGTC 1796557 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 >seq5 Length=3814559 Score = 86.0 bits (94), Expect = 1e-11 Identities = 239/360 (66%), Gaps = 14/360 (4%) Strand=Plus/Plus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAA-AAGCCCGGAGGTGATGACCTG 160570 ||||||| |||| |||||||||| | | || |||| || | ||| || || | Sbjct 1504369 TGGCACGCTGACGTCTTTGACTTCTTGAACTTGAGAAAGAATCACGGCAAAGAAGA---G 1504425 Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT- 160629 | |||| | || | ||||| ||| |||||||| | ||||||||||||||| | || Sbjct 1504426 GTCCGAGCACGCGACTTGTTCTATGCCCTCTGGACTCCGGATCTTTTCATGAAGCGTGTC 1504485 Query 160630 GA-AAGA--CAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGA 160686 || |||| ||| || |||| || ||||||||| | ||||| || || || | || Sbjct 1504486 GAGAAGAACCAA----GACTGGACTCTGTTCTGTCCCCACGAAGCCCCGGGTCTCGCCGA 1504541 Query 160687 TGTTTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAA 160746 || || || ||| |||||| | || || || | |||||| ||||| || | | Sbjct 1504542 CGTCTACGGGGACGAATTCGAGGCCCTGTACGAGAAATACGAGAAAGAAGGCCGCGGGCG 1504601 Query 160747 AAAGGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGG 160806 || | | |||||||| | |||||| | |||| | || || |||| || Sbjct 1504602 TCAGACCATCAAGGCCCAGAAGCTGTGGTACGCGGTCCTCGAGGCACAGACCGAGACTGG 1504661 Query 160807 TATGCCCTTTATCGCATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 || || | ||| ||||||||||| | ||||| |||||||||||||| || Sbjct 1504662 TACCCCATACATCCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACTTGGG 1504721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481429417204