Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 3e-26
seq5 86.0 1e-11
>seq3
Length=4818847
Score = 134 bits (148), Expect = 3e-26
Identities = 140/182 (77%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| ||| || || | ||||||||||| ||
Sbjct 1796614 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGTTG 1796673
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||||||||||||||| || || ||||| |||||||||||||| ||||| ||||| ||
Sbjct 1796674 TTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTT 1796733
Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||||||||| || ||||| | | | || || || || ||||| | ||||||||
Sbjct 1796734 CGACTTGACGTTGTCGATGGTATCGCTGGAC--TCAACCTCGAGGGTGATGGTCTTTCCC 1796791
Query 195115 GT 195116
||
Sbjct 1796792 GT 1796793
Score = 122 bits (134), Expect = 2e-22
Identities = 157/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
|| || |||||||| || || || || || ||||| ||| |||| || | ||||| ||
Sbjct 1796381 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAG-GTGCGGCCATCCTC 1796439
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || ||||||||||| ||||| ||||| || ||||||||||| ||||| ||
Sbjct 1796440 AAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTG 1796499
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||| || ||||| | | | || || || ||||| || | |||
Sbjct 1796500 GATCTTGGACTTGACGTTGTCGATGGTATCGCTGGAC--TCGACCTCAAGAGTGATGGTC 1796557
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || ||||| | |||||
Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
>seq5
Length=3814559
Score = 86.0 bits (94), Expect = 1e-11
Identities = 239/360 (66%), Gaps = 14/360 (4%)
Strand=Plus/Plus
Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAA-AAGCCCGGAGGTGATGACCTG 160570
||||||| |||| |||||||||| | | || |||| || | ||| || || |
Sbjct 1504369 TGGCACGCTGACGTCTTTGACTTCTTGAACTTGAGAAAGAATCACGGCAAAGAAGA---G 1504425
Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT- 160629
| |||| | || | ||||| ||| |||||||| | ||||||||||||||| | ||
Sbjct 1504426 GTCCGAGCACGCGACTTGTTCTATGCCCTCTGGACTCCGGATCTTTTCATGAAGCGTGTC 1504485
Query 160630 GA-AAGA--CAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGA 160686
|| |||| ||| || |||| || ||||||||| | ||||| || || || | ||
Sbjct 1504486 GAGAAGAACCAA----GACTGGACTCTGTTCTGTCCCCACGAAGCCCCGGGTCTCGCCGA 1504541
Query 160687 TGTTTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAA 160746
|| || || ||| |||||| | || || || | |||||| ||||| || | |
Sbjct 1504542 CGTCTACGGGGACGAATTCGAGGCCCTGTACGAGAAATACGAGAAAGAAGGCCGCGGGCG 1504601
Query 160747 AAAGGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGG 160806
|| | | |||||||| | |||||| | |||| | || || |||| ||
Sbjct 1504602 TCAGACCATCAAGGCCCAGAAGCTGTGGTACGCGGTCCTCGAGGCACAGACCGAGACTGG 1504661
Query 160807 TATGCCCTTTATCGCATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
|| || | ||| ||||||||||| | ||||| |||||||||||||| ||
Sbjct 1504662 TACCCCATACATCCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACTTGGG 1504721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481429417204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |