Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
>seq3
Length=4818847
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| ||||| || ||||| ||||| || || || || |||| ||||
Sbjct 1795921 CAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATC 1795980
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||||||| || || ||||| || | ||| || ||||| | || | |||||||||||
Sbjct 1795981 TTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC 1796040
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| |||||| | || | ||| | || || || | ||| || ||
Sbjct 1796041 TTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGT 1796100
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||||||||| || ||||| ||||||
Sbjct 1796101 CTTGCCAGTGAGAGTCTTGACGAAGATTTGCATA 1796134
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
||| ||||| ||||| ||||| | |||| | || |||| || ||||| ||||| || |
Sbjct 1796398 TTCCTTCTGGATGTTGTAGTCGCTCAAGG-TGCGGCCATCCTCAAGCTGCTTTCCAGCGA 1796456
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || || ||||||||||| | || | || |||||||| ||||| ||||||
Sbjct 1796457 AGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGT 1796516
Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
| || | || | || ||| || || | || ||||| || ||||| || ||||| |
Sbjct 1796517 TGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGA 1796576
Query 34969 CAAAGATCTGCATA 34982
| ||||||||||||
Sbjct 1796577 CGAAGATCTGCATA 1796590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633552522336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |