Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq5 196 9e-45
>seq5
Length=3814559
Score = 196 bits (216), Expect = 9e-45
Identities = 762/1185 (64%), Gaps = 41/1185 (3%)
Strand=Plus/Minus
Query 221354 GACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGAC 221413
|| || || || || ||||| | ||| || ||||| | | | || | |||| ||
Sbjct 1505147 GAGACTGGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTCCTTTGCAAGTTCGCACGA- 1505089
Query 221414 TGCG-TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTC 221472
|||| | ||||||||||| ||||||||||| ||||| ||| ||| ||| ||
Sbjct 1505088 TGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGACGTTAAGTTGTCGGGCTTC 1505029
Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532
|| ||| ||| || | |||||| | ||| | || || || || || || || |
Sbjct 1505028 CGGTGAATCGAAAGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGGACACCCAG 1504969
Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
||| | ||| | ||| | ||| || || |||||||||||| |||||||
Sbjct 1504968 ACCAACGGGTCGGTGACGGAAATTGCTCTTTCTGGCCTCAGGCACGGGATAATAGTTGAC 1504909
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC-TGGT 221651
|||||| | ||||| | ||| |||||| | |||| ||| | |||| ||
Sbjct 1504908 GTCGATGATCTTGTTCAAGTTGCGAGTGA---------CAACCTGGGTGA-CTTCGTGAA 1504859
Query 221652 GATTG---AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708
|| | || | | ||||| | | ||| ||||| || | | |||||||
Sbjct 1504858 GACGGCCGAAGTCATATTCGCCACGAGCCTGG------TCCACGAAGGTGGGAAGGGCAA 1504805
Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768
| ||| ||||| || ||||| ||||| || | || | | | ||| || || |
Sbjct 1504804 GGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGC 1504745
Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGT 221828
| |||||| || ||| || |||| || || || || ||| ||| ||| |
Sbjct 1504744 ACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1504685
Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888
|||||||||| || | || |||||||| ||| ||| | || | | || ||| |
Sbjct 1504684 CCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCACA 1504625
Query 221889 GTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTT--TTC----ATACCCG 221941
| | ||||| || | ||| |||| ||| ||| ||| ||| || |
Sbjct 1504624 GCT-TCTGGGCCTTGATGGTC----TGACG---CCCGCGGCCTTCTTTCTCGTATTTCTC 1504573
Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001
||| || || | | || | || ||||| | ||| | || || || | ||||
Sbjct 1504572 GTACAGGGCCT--CGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGA 1504515
Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061
|| | |||| |||||| | ||| | | ||| | || |||||| || ||||| ||||
Sbjct 1504514 CAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAG 1504455
Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121
|| || | || | || | | || ||| || ||||| || || |||| | |
Sbjct 1504454 AGGGCATAGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTC 1504395
Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181
|| || ||||| | |||||||||||| ||||||||||||| ||| | || || || |||
Sbjct 1504394 AAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGC 1504335
Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTAC 222240
|||||||||||||| || || || ||| | |||||||| |||||| | || |
Sbjct 1504334 TTGTTGCCACCCTGGTCAAC-ATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAAT 1504276
Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300
|| |||||||| || || || || ||||| | |||| ||| | | | |
Sbjct 1504275 GAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATG 1504216
Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
|||| | ||||||||| ||||| || ||||||||||| || ||||||| |||||
Sbjct 1504215 GGCATTGAGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTC 1504156
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||||||||| || ||| ||||| | | | || || || ||||||| ||| |
Sbjct 1504155 GTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGG 1504096
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
|| | | | || || || || |||||| |||||| |||||| | | ||||||
Sbjct 1504095 TTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACAT 1504036
Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525
|| | ||||||||| | | | | | | | ||||||||||||
Sbjct 1504035 GAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAAT 1503991
Score = 123 bits (136), Expect = 5e-23
Identities = 183/254 (72%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 25786 CTGTTTGGTGCCATCGAGCACA-TACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAA 25844
||||| | |||||| || |||| | ||| ||||| | ||| || ||||| |||||
Sbjct 1110845 CTGTTCGATGCCATTGA-CACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAA 1110903
Query 25845 GTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGG 25903
||||||| | | || || | | | || | | | || ||||| || || |||||||| |
Sbjct 1110904 GTGGATCG-CGGACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCG 1110962
Query 25904 AGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCA 25963
| |||||||| ||| ||||| || || ||||||||||| | ||| ||||| ||
Sbjct 1110963 AAGGCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCA 1111022
Query 25964 TGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023
||||||| ||| || ||||||||||||||| | || |||||| | || | || |
Sbjct 1111023 TGCCCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACT 1111082
Query 26024 TTGCCTGCCTGCTC 26037
|||||||||| |||
Sbjct 1111083 TTGCCTGCCTTCTC 1111096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844660673280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |