Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 196 9e-45 >seq5 Length=3814559 Score = 196 bits (216), Expect = 9e-45 Identities = 762/1185 (64%), Gaps = 41/1185 (3%) Strand=Plus/Minus Query 221354 GACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGAC 221413 || || || || || ||||| | ||| || ||||| | | | || | |||| || Sbjct 1505147 GAGACTGGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTCCTTTGCAAGTTCGCACGA- 1505089 Query 221414 TGCG-TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTC 221472 |||| | ||||||||||| ||||||||||| ||||| ||| ||| ||| || Sbjct 1505088 TGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGACGTTAAGTTGTCGGGCTTC 1505029 Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 || ||| ||| || | |||||| | ||| | || || || || || || || | Sbjct 1505028 CGGTGAATCGAAAGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGGACACCCAG 1504969 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 ||| | ||| | ||| | ||| || || |||||||||||| ||||||| Sbjct 1504968 ACCAACGGGTCGGTGACGGAAATTGCTCTTTCTGGCCTCAGGCACGGGATAATAGTTGAC 1504909 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC-TGGT 221651 |||||| | ||||| | ||| |||||| | |||| ||| | |||| || Sbjct 1504908 GTCGATGATCTTGTTCAAGTTGCGAGTGA---------CAACCTGGGTGA-CTTCGTGAA 1504859 Query 221652 GATTG---AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 || | || | | ||||| | | ||| ||||| || | | ||||||| Sbjct 1504858 GACGGCCGAAGTCATATTCGCCACGAGCCTGG------TCCACGAAGGTGGGAAGGGCAA 1504805 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | ||| ||||| || ||||| ||||| || | || | | | ||| || || | Sbjct 1504804 GGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGC 1504745 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGT 221828 | |||||| || ||| || |||| || || || || ||| ||| ||| | Sbjct 1504744 ACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1504685 Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888 |||||||||| || | || |||||||| ||| ||| | || | | || ||| | Sbjct 1504684 CCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCACA 1504625 Query 221889 GTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTT--TTC----ATACCCG 221941 | | ||||| || | ||| |||| ||| ||| ||| ||| || | Sbjct 1504624 GCT-TCTGGGCCTTGATGGTC----TGACG---CCCGCGGCCTTCTTTCTCGTATTTCTC 1504573 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| || || | | || | || ||||| | ||| | || || || | |||| Sbjct 1504572 GTACAGGGCCT--CGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGA 1504515 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | |||| |||||| | ||| | | ||| | || |||||| || ||||| |||| Sbjct 1504514 CAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAG 1504455 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 || || | || | || | | || ||| || ||||| || || |||| | | Sbjct 1504454 AGGGCATAGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTC 1504395 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 || || ||||| | |||||||||||| ||||||||||||| ||| | || || || ||| Sbjct 1504394 AAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGC 1504335 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTAC 222240 |||||||||||||| || || || ||| | |||||||| |||||| | || | Sbjct 1504334 TTGTTGCCACCCTGGTCAAC-ATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAAT 1504276 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300 || |||||||| || || || || ||||| | |||| ||| | | | | Sbjct 1504275 GAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATG 1504216 Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 |||| | ||||||||| ||||| || ||||||||||| || ||||||| ||||| Sbjct 1504215 GGCATTGAGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTC 1504156 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||||||||| || ||| ||||| | | | || || || ||||||| ||| | Sbjct 1504155 GTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGG 1504096 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 || | | | || || || || |||||| |||||| |||||| | | |||||| Sbjct 1504095 TTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACAT 1504036 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 || | ||||||||| | | | | | | | |||||||||||| Sbjct 1504035 GAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAAT 1503991 Score = 123 bits (136), Expect = 5e-23 Identities = 183/254 (72%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 25786 CTGTTTGGTGCCATCGAGCACA-TACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAA 25844 ||||| | |||||| || |||| | ||| ||||| | ||| || ||||| ||||| Sbjct 1110845 CTGTTCGATGCCATTGA-CACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAA 1110903 Query 25845 GTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGG 25903 ||||||| | | || || | | | || | | | || ||||| || || |||||||| | Sbjct 1110904 GTGGATCG-CGGACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCG 1110962 Query 25904 AGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCA 25963 | |||||||| ||| ||||| || || ||||||||||| | ||| ||||| || Sbjct 1110963 AAGGCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCA 1111022 Query 25964 TGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023 ||||||| ||| || ||||||||||||||| | || |||||| | || | || | Sbjct 1111023 TGCCCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACT 1111082 Query 26024 TTGCCTGCCTGCTC 26037 |||||||||| ||| Sbjct 1111083 TTGCCTGCCTTCTC 1111096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844660673280