Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 8e-20
seq5 95.1 8e-14
>seq3
Length=4818847
Score = 114 bits (126), Expect = 8e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| || | ||| |||||||| ||||| ||| || | || ||||||| || |||
Sbjct 1796141 CGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTT 1796200
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
||| ||| ||||||||||| || || || || || || ||||| || || |||||||||
Sbjct 1796201 CTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCT 1796260
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
||||||||||| ||||| |||||| || || || || | | ||| |||
Sbjct 1796261 TCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGG 1796320
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || ||||| || ||||| ||||| || ||
Sbjct 1796321 GTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTG 1796358
Score = 111 bits (122), Expect = 1e-18
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || | || | ||||| || || || || | || ||||||| |||||
Sbjct 1795912 ACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGT 1795971
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | |||||| || ||||| |||||||| || | || ||||| ||||| ||||| ||
Sbjct 1795972 TCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCC 1796031
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||||| ||||| ||||| || ||||| |||| | || ||
Sbjct 1796032 CTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAG 1796091
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| || || || ||||||||||| ||||| |||||
Sbjct 1796092 GGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTG 1796130
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || |||||||| ||| ||| || | || || || ||| ||
Sbjct 1796368 ACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTC-GCTCAAGG 1796426
Query 480611 T-CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | ||| ||||| ||||||||||| || ||||||||||| || ||||| ||||| |
Sbjct 1796427 TGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGC 1796486
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729
|||||||||| || ||||| ||||| || || ||||| || ||||
Sbjct 1796487 CTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAA 1796546
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || || || ||||| ||||| || ||
Sbjct 1796547 GAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTG 1796586
>seq5
Length=3814559
Score = 95.1 bits (104), Expect = 8e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705
|| || ||| | || ||| | || || || ||||| || |||| ||| | | |||||
Sbjct 3178710 AAGCAGTTTACCCCCGAAGAGATCTCATCCATGGTCTTGACCAAGATGCGAGAGACCGCA 3178651
Query 474706 GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAA 474765
||| ||||||||||| ||| | | || || | ||||| || || || || ||
Sbjct 3178650 GAG-TCATATCTTGGTGGCACAGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAA 3178592
Query 474766 TGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACG 474825
|||||||| |||||||| || |||||||| || || || || || ||||| | ||
Sbjct 3178591 CGATTCTCAGCGTCAAGCTACCAAAGATGCCGGTCTGATCGCTGGCCTCAATGTCCTCCG 3178532
Query 474826 TATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
||| || || || || || || || || | || |||||||| || |||||
Sbjct 3178531 TATCATCAACGAGCCGACCGCCGCAGCCATCGCCTATGGTCTCGACAAGAA 3178481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178685261776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |