Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 6e-16
>seq3
Length=4818847
Score = 100 bits (110), Expect = 6e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| || || || || || | ||| ||| || ||| || ||||||||
Sbjct 1795906 ACCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1795965
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| ||||| |||| |||| || || ||||||||||| |||| |||||| ||||| ||
Sbjct 1795966 GAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGG 1796025
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || || || ||||| || || || || || |||| || || ||||| ||
Sbjct 1796026 AATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| || || ||||| | || || | || || |||||
Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 100 bits (110), Expect = 6e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || |||||||| | ||||| |||| || | ||| || || || ||||| | |
Sbjct 1796179 GATGTTGTAATCAGAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCG 1796238
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|||||| || || || |||||||| || ||||| || || || ||||| || |
Sbjct 1796239 CTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGT 1796298
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||||||||||| ||||| || |||||||| || || |||| || || | || |||||
Sbjct 1796299 GTCTGACGATTCGACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTG 1796358
Query 192534 CAT 192536
|||
Sbjct 1796359 CAT 1796361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479848636200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |