Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 5e-16
>seq3
Length=4818847
Score = 100 bits (110), Expect = 5e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | |||||| || || || || | ||| ||| || || || ||||| ||
Sbjct 1795906 ACCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1795965
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || ||| | || |||| || || |||||||| || |||| |||||||||||| ||
Sbjct 1795966 GAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGG 1796025
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| || || || ||||| || || || || || ||||| || || ||||| ||
Sbjct 1796026 AATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| || || ||||| | || || | ||| || |||||
Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | ||| || || || || || | | ||||||||| || || |||||||| ||
Sbjct 1796207 TCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTG 1796266
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| || || || ||||| || || ||||||||||| ||||| || ||||||
Sbjct 1796267 TCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATG 1796326
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || |||| || || | ||| ||||||||
Sbjct 1796327 GTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135864229600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |