Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 100 5e-16 >seq3 Length=4818847 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | |||||| || || || || | ||| ||| || || || ||||| || Sbjct 1795906 ACCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1795965 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || ||| | || |||| || || |||||||| || |||| |||||||||||| || Sbjct 1795966 GAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGG 1796025 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || || || || ||||| || || || || || ||||| || || ||||| || Sbjct 1796026 AATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || || ||||| | || || | ||| || ||||| Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | ||| || || || || || | | ||||||||| || || |||||||| || Sbjct 1796207 TCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTG 1796266 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || || ||||| || || ||||||||||| ||||| || |||||| Sbjct 1796267 TCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATG 1796326 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||| || || | ||| |||||||| Sbjct 1796327 GTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135864229600