Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 147 6e-30 seq6 98.7 3e-15 >seq5 Length=3814559 Score = 147 bits (162), Expect = 6e-30 Identities = 348/521 (67%), Gaps = 11/521 (2%) Strand=Plus/Minus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 || |||| || || ||| ||||||||| || || ||| || || || |||||||||| Sbjct 1504765 TGAATTCGACGATTTCAGTGCACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGT 1504706 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || |||| |||||||||||||| || ||||||||||| || ||||| |||||| Sbjct 1504705 TGCTCTTCTTGTTGCAAGCATCCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTG 1504646 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808 | || || | | ||| || | |||| || || || | |||||| Sbjct 1504645 CCTCGAGGACCGCGTACCACAGCTTCTGGGCCTTGATGGTCTGACGCCCGCGGCCTTCTT 1504586 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| |||||| ||||| | | | || || ||||| || || || ||| Sbjct 1504585 TCTCGTATTTCTCGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGG 1504526 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTT---TATTACCGATTACACGCTCCATAAATA 155925 | | ||| || ||||| | ||| || | || ||| |||||| ||| || | Sbjct 1504525 CTTCGTGGGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGA---CACGCTTCATGAAAA 1504469 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGA 155984 ||| | ||| | |||||||| | ||| | ||| | ||| || || | ||||||| Sbjct 1504468 GATCCGGAGTCCAGAGGGCATAGAACAAGTCGCGTGC-TCGGACCTCTTCTTTGCCGTGA 1504410 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| | | | ||||| || | |||| || |||||||||||| || ||| Sbjct 1504409 TTCTTTCTCAAGTTCAAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCA 1504350 Query 156045 AAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || ||| | | | ||||||||||| || ||||| |||||||| || |||||||| Sbjct 1504349 AAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACG 1504290 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 | ||||| ||||| | ||| ||||| |||||||| || || Sbjct 1504289 CGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACC 1504249 >seq6 Length=3558010 Score = 98.7 bits (108), Expect = 3e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484 || || ||||| ||| | | ||| ||| | || | || || ||||| ||| | | Sbjct 1838264 CAGACGTGGACTCTGAAGGGATCCGATACATCGAAGAGACGCTCCTTGAGGAATGAACTT 1838205 Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | ||||| ||||| |||||||||||||||||||| |||||||| || || Sbjct 1838204 GCGCCGTGGGCGATCATGCAATCGCGCTCCATTTCACCGAAACGTAGACCACCGTCTCGG 1838145 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 || | ||| || ||||||| |||||||| Sbjct 1838144 GCACGACCTTCCACAGGCTGGCGAGTGAG 1838116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817373708044