Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq5 141 1e-27
seq2 141 1e-27
seq6 87.8 2e-11
>seq5
Length=3814559
Score = 141 bits (156), Expect = 1e-27
Identities = 186/258 (72%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || ||||| || |||| ||| |||||||| |||||||| | ||| ||||||||
Sbjct 1504323 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGA 1504264
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||| || || || | | ||||| |||| ||| || | || || | |||
Sbjct 1504263 GGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGCC 1504204
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || ||||| | ||||||||| | || || ||||| |||||||||||||||||
Sbjct 1504203 GATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTC 1504144
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| |||| ||||||| || | | ||||| ||||| || || || | ||| ||
Sbjct 1504143 GATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCC 1504084
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
|| |||||||| |||||
Sbjct 1504083 AGCATTGAAGAGAGTGGG 1504066
Score = 111 bits (122), Expect = 2e-18
Identities = 249/368 (68%), Gaps = 12/368 (3%)
Strand=Plus/Plus
Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147
|||||||||| || || ||||| | ||||||||||||| |||| ||| ||
Sbjct 1496689 GTCACCACCTACGGTGAATCGCATTGCCGATCCGTCGGCTGCATCGTCGATGGCTGCCCT 1496748
Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207
|| |||||| || |||||| |||||||||||| ||| || ||||| ||||| ||
Sbjct 1496749 CCCGGCATGCAGTTGACCGAGGACGACATCCAGCCGCAGATGACACGGCGGCGACCCGGT 1496808
Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267
|| || || | |||||||| |||||| || || || ||||| || |||||
Sbjct 1496809 CAATCTGCGCTCACGACGCCGCGGAACGAGAAGGACCGAGTGGAGATCCAATCTGGCACT 1496868
Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327
|| ||| |||||||||| ||||| ||||| | | ||| || |||||| ||
Sbjct 1496869 GAATTCGGAGTCACGCTCGGGACGCCCATCGGCATGGTGGTGAGGAATGAAGACCAGAGG 1496928
Query 18328 CCCGTCGACTAT-----TCCGAC-ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTAC 18381
||| |||||| | ||| ||| ||||||||| || || || | |
Sbjct 1496929 CCCAAGGACTATGGTGGCCAGACTATGGATCTCTACCCGCGGCCCAGCCATGCGGATTTC 1496988
Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCG-TCGTCGGGCGGAGGCCG--GTCGTCTGCC 18438
||||| ||| |||||||| | |||||| | |||| |||||||| || | |||
Sbjct 1496989 ACCTATCTGGAGAAGTACGGAGTGAAGGCGAGCAGCGGG-GGAGGCCGAAGTAG--CGCC 1497045
Query 18439 CGCGAGAC 18446
||||||||
Sbjct 1497046 CGCGAGAC 1497053
Score = 109 bits (120), Expect = 7e-18
Identities = 110/140 (79%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA---GGCCTCGGC 19103
||||||||||| ||||| |||||||||||| ||| ||| |||| || || |||||
Sbjct 1497384 GACAGCATCGGAGGCACCGTGACGTGCGTGATTCGGAAC-TGCC--CAATCGGGCTCGGT 1497440
Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163
||||||||||| || ||| | ||||||| ||| || || |||||| || || ||||||
Sbjct 1497441 GAGCCGTGCTTCGATAAGCTTGAGGCCGAGCTTGCACATGCCATGTTGAGCATTCCGGCC 1497500
Query 19164 ACCAAGGGATTCGAGATTGG 19183
||||| || || ||||| ||
Sbjct 1497501 ACCAAAGGGTTTGAGATCGG 1497520
Score = 89.7 bits (98), Expect = 6e-12
Identities = 94/123 (76%), Gaps = 3/123 (2%)
Strand=Plus/Minus
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| |||||||||||||| ||| || ||||||||||||||
Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATGCCGAGC 1111204
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC---GACG 868927
|| || ||||| | ||| ||| ||||| ||||||||| |||| ||| | ||||
Sbjct 1111203 AGGGCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGACG 1111144
Query 868928 ATG 868930
|||
Sbjct 1111143 ATG 1111141
>seq2
Length=5110098
Score = 141 bits (156), Expect = 1e-27
Identities = 111/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || ||| | ||||| || ||||||||||||||||||||| |||| ||||| | ||
Sbjct 1501141 CTGTTCGAGATCATCCTGGCTGCCAACTACCTCGACATCAAGGCTCTTCTCGACGTGGGC 1501200
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | ||||| |||||||||||||||||||| || || || ||||||||||||||
Sbjct 1501201 TGCAAGACCGTGGCAAACATGATCAAGGGCAAGTCACCAGAAGAAATCCGCAAGACCTTC 1501260
Query 1592288 AACATCAAGTACG 1592300
|||||| || |||
Sbjct 1501261 AACATCCAGAACG 1501273
>seq6
Length=3558010
Score = 87.8 bits (96), Expect = 2e-11
Identities = 154/223 (69%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 1572512 TCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCT 1572571
|||| ||||||||| |||| || ||||||||||| ||||| || |||||||| ||
Sbjct 3078041 TCGGCGTGGTTGAACAGCAACACCTTGACCTCGCCGCGGTAGTCAGCGTCGATGACACCC 3078100
Query 1572572 GCGCCGACGTCGATG----CCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGCCCATA 1572627
||||| ||||||| | ||| ||||| || |||||||||||||| || ||
Sbjct 3078101 GCGCCCGTGTCGATGAAGTGCTTCGAC-GCCAGCCCGGACCGCGGCGCCACGCGGCCGTA 3078159
Query 1572628 GTAGCCCGCGGGTATGGCCACGGCCAGACCGGTGCGCACCTGCGCGCGGCCGCGTGCCGG 1572687
|||| |||| | || | ||||| | || |||| || | ||||| || ||
Sbjct 3078160 CGTGCCCTCGGGGGTCGCGATCGCCAGGTCCGTCGACACCAGCACCTTTCCGCGGGCTGG 3078219
Query 1572688 CACGGTCGTCGTCCCGACAGCCCACAGATCGTATCCGGCGGCG 1572730
| || |||| || | || |||| ||||| |||||||||
Sbjct 3078220 GATCGTTGTCGGCCGGGACGCGTACAGGTCGTAGCCGGCGGCG 3078262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138215223804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |