Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 141 1e-27 seq2 141 1e-27 seq6 87.8 2e-11 >seq5 Length=3814559 Score = 141 bits (156), Expect = 1e-27 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| || |||| ||| |||||||| |||||||| | ||| |||||||| Sbjct 1504323 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGA 1504264 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| || || || | | ||||| |||| ||| || | || || | ||| Sbjct 1504263 GGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGCC 1504204 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||| | ||||||||| | || || ||||| ||||||||||||||||| Sbjct 1504203 GATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTC 1504144 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| |||| ||||||| || | | ||||| ||||| || || || | ||| || Sbjct 1504143 GATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCC 1504084 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || |||||||| ||||| Sbjct 1504083 AGCATTGAAGAGAGTGGG 1504066 Score = 111 bits (122), Expect = 2e-18 Identities = 249/368 (68%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| || || ||||| | ||||||||||||| |||| ||| || Sbjct 1496689 GTCACCACCTACGGTGAATCGCATTGCCGATCCGTCGGCTGCATCGTCGATGGCTGCCCT 1496748 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 || |||||| || |||||| |||||||||||| ||| || ||||| ||||| || Sbjct 1496749 CCCGGCATGCAGTTGACCGAGGACGACATCCAGCCGCAGATGACACGGCGGCGACCCGGT 1496808 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 || || || | |||||||| |||||| || || || ||||| || ||||| Sbjct 1496809 CAATCTGCGCTCACGACGCCGCGGAACGAGAAGGACCGAGTGGAGATCCAATCTGGCACT 1496868 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || ||| |||||||||| ||||| ||||| | | ||| || |||||| || Sbjct 1496869 GAATTCGGAGTCACGCTCGGGACGCCCATCGGCATGGTGGTGAGGAATGAAGACCAGAGG 1496928 Query 18328 CCCGTCGACTAT-----TCCGAC-ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | ||| ||| ||||||||| || || || | | Sbjct 1496929 CCCAAGGACTATGGTGGCCAGACTATGGATCTCTACCCGCGGCCCAGCCATGCGGATTTC 1496988 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCG-TCGTCGGGCGGAGGCCG--GTCGTCTGCC 18438 ||||| ||| |||||||| | |||||| | |||| |||||||| || | ||| Sbjct 1496989 ACCTATCTGGAGAAGTACGGAGTGAAGGCGAGCAGCGGG-GGAGGCCGAAGTAG--CGCC 1497045 Query 18439 CGCGAGAC 18446 |||||||| Sbjct 1497046 CGCGAGAC 1497053 Score = 109 bits (120), Expect = 7e-18 Identities = 110/140 (79%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA---GGCCTCGGC 19103 ||||||||||| ||||| |||||||||||| ||| ||| |||| || || ||||| Sbjct 1497384 GACAGCATCGGAGGCACCGTGACGTGCGTGATTCGGAAC-TGCC--CAATCGGGCTCGGT 1497440 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||||||||| || ||| | ||||||| ||| || || |||||| || || |||||| Sbjct 1497441 GAGCCGTGCTTCGATAAGCTTGAGGCCGAGCTTGCACATGCCATGTTGAGCATTCCGGCC 1497500 Query 19164 ACCAAGGGATTCGAGATTGG 19183 ||||| || || ||||| || Sbjct 1497501 ACCAAAGGGTTTGAGATCGG 1497520 Score = 89.7 bits (98), Expect = 6e-12 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| |||||||||||||| ||| || |||||||||||||| Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATGCCGAGC 1111204 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC---GACG 868927 || || ||||| | ||| ||| ||||| ||||||||| |||| ||| | |||| Sbjct 1111203 AGGGCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGACG 1111144 Query 868928 ATG 868930 ||| Sbjct 1111143 ATG 1111141 >seq2 Length=5110098 Score = 141 bits (156), Expect = 1e-27 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| | ||||| || ||||||||||||||||||||| |||| ||||| | || Sbjct 1501141 CTGTTCGAGATCATCCTGGCTGCCAACTACCTCGACATCAAGGCTCTTCTCGACGTGGGC 1501200 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct 1501201 TGCAAGACCGTGGCAAACATGATCAAGGGCAAGTCACCAGAAGAAATCCGCAAGACCTTC 1501260 Query 1592288 AACATCAAGTACG 1592300 |||||| || ||| Sbjct 1501261 AACATCCAGAACG 1501273 >seq6 Length=3558010 Score = 87.8 bits (96), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 1572512 TCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCT 1572571 |||| ||||||||| |||| || ||||||||||| ||||| || |||||||| || Sbjct 3078041 TCGGCGTGGTTGAACAGCAACACCTTGACCTCGCCGCGGTAGTCAGCGTCGATGACACCC 3078100 Query 1572572 GCGCCGACGTCGATG----CCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGCCCATA 1572627 ||||| ||||||| | ||| ||||| || |||||||||||||| || || Sbjct 3078101 GCGCCCGTGTCGATGAAGTGCTTCGAC-GCCAGCCCGGACCGCGGCGCCACGCGGCCGTA 3078159 Query 1572628 GTAGCCCGCGGGTATGGCCACGGCCAGACCGGTGCGCACCTGCGCGCGGCCGCGTGCCGG 1572687 |||| |||| | || | ||||| | || |||| || | ||||| || || Sbjct 3078160 CGTGCCCTCGGGGGTCGCGATCGCCAGGTCCGTCGACACCAGCACCTTTCCGCGGGCTGG 3078219 Query 1572688 CACGGTCGTCGTCCCGACAGCCCACAGATCGTATCCGGCGGCG 1572730 | || |||| || | || |||| ||||| ||||||||| Sbjct 3078220 GATCGTTGTCGGCCGGGACGCGTACAGGTCGTAGCCGGCGGCG 3078262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138215223804