Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq5 212 6e-50 seq3 143 2e-29 >seq5 Length=3814559 Score = 212 bits (234), Expect = 6e-50 Identities = 1124/1764 (64%), Gaps = 92/1764 (5%) Strand=Plus/Minus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||| | ||||| ||||||||||||||||||||| || ||||| | | | | Sbjct 1505591 ATGTTCAGAGATTGGGACTGATCGATGAAAGCGCCTCGGTCGGCAGCCATCTGGAGAACA 1505532 Query 138346 TTTTTACTTT---TCATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATT 138402 || || | |||||||| || |||||||| || | |||| ||| || Sbjct 1505531 GC---ACGTTGGCTGATCTCCCAGACAGTCTTGTAGAGGGCCTTGATATCGGCCGGGATG 1505475 Query 138403 GTTGCAATATTTTGAAT---GCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCG 138459 | | || || || | || |||| ||| ||||||||||| |||||| ||| Sbjct 1505474 TTGGGGATGTTCTGGACAGAGCCACCGTCGGCG---ATGATGCGATTCTTCATGTTGTCG 1505418 Query 138460 TTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCA 138519 | ||| | | || || ||| || | || || ||| | ||| || || ||| Sbjct 1505417 GACCAGAGACCAAGGTCGACCAGGTCCTTCAGGAGCCATGGGTTGACGACTTGGAACTCA 1505358 Query 138520 CCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTT 138579 || ||||| || ||||| ||| ||||| |||| | ||||| || |||||||||| Sbjct 1505357 CCAGCCAACACACGACGCGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTTG 1505298 Query 138580 CCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAA 138639 |||| ||||| | |||| || || |||||| || || | ||||| || || | | Sbjct 1505297 CCCAAGATCTGCGAAGTGGATGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACA 1505238 Query 138640 CCGTGAAGCTTG---AT-TCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTT 138695 ||||| ||| || ||| |||| | ||| ||| ||||||| || || || | Sbjct 1505237 CCGTGT---TTGGCAATCTCGG-CCTTCAACGAATCCCAATCCCACAGGTCACTGGGAGT 1505182 Query 138696 TTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACG 138751 |||||||| |||||||| | || ||| | ||| || ||||||||||| | Sbjct 1505181 GACATTCCACATGTCGTACTGAAGAATACCCTGCGAGACT----GGGCTGCCTTCGTAGG 1505126 Query 138752 AATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCG---AGCGCACCATAGT 138808 || || ||| ||| | || | ||| | || || || ||| | | | Sbjct 1505125 TCTCATAAGGACCCTCCTCCTTTGCAAGTTCG---CACGATGCGGTAAGGGCAGCGTGAT 1505069 Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868 | || || ||| || || || || |||||| || | ||| | || | | Sbjct 1505068 AGATGGTCTCGAAGATTTGGACGTTAAGTTGTCGGGCTTCCGGTGAATCGAAAGGAAGAC 1505009 Query 138869 G--GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 | ||||| | || || || || || ||||| || |||| || || || || || || Sbjct 1505008 GCAGAGCAAGG--AAGGCATCTGCAAGACCTTGGACACCCAGACCAACGGGTCGGTGACG 1504951 Query 138927 CAGATTTGACGCTTTTGC-GGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTGT 138982 | ||| ||| || | ||| || | ||||||||||| || |||||||| |||| Sbjct 1504950 GAAATT----GCTCTTTCTGGCCTCAGGCACGGGATAATAGTTGACGTCGATGATCTTGT 1504895 Query 138983 TTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAAT-CGTTCAAAATCGTATGTGCCC 139041 | || || || ||| |||| || | | | | || || | || || ||| ||| Sbjct 1504894 TCAAGTTGCGAGTGACAACCTGGGT-GACTTCGTGAAGACGGCCGAAGTCATATTCGCCA 1504836 Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101 | | ||| |||| | | || | || | ||||| | |||||| || Sbjct 1504835 CGAGCCTGGTCCACGAAGGTGGGAAG------GGCA---AGGGAGGCAAGGTTGCATACG 1504785 Query 139102 GCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 || || || || ||| | || ||||||| ||||| | |||| || | |||| Sbjct 1504784 GCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGCACAGGTTGGAGCTTCGGATC 1504725 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 ||||| || || | || ||||| || ||| |||||||| ||||| || || || || Sbjct 1504724 GTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGGATGTATGGG 1504665 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATT--- 139278 || ||||| || |||| ||| | | | ||| | | || | || Sbjct 1504664 GTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCACAGCTTCTGGGCCTTGATGGTC 1504605 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCG 139338 |||||| || ||| | |||||| || ||||| || | |||||| || ||| Sbjct 1504604 TGACGCCCGCGGCCTTCTTT---CTCGTATTTCTCGTACAGGGCCTCGAATTCGTCCCCG 1504548 Query 139339 TAGGCGTCAGAAAGATCGCGACACTT-GTCAGGACACATGAGCGACCATACGCCGTTCGC 139397 ||| |||| | ||| | || ||| || ||||| | || | ||| | |||| Sbjct 1504547 TAGACGTCGGCGAGACC-CGGGGCTTCGTGGGGACAGAACAGAGTCCAGTCTTGGTTCTT 1504489 Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC--- 139454 || ||| ||| ||||||| ||||||||| |||| | || | | ||| ||||| || Sbjct 1504488 CTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGAACAAGTCGCGTGCTCG 1504429 Query 139455 --CTTCTTATCTTCCGAACCCATGTTACGTT-TCATGTTAAGGAAATCAAAAACGTCAGC 139511 | |||| | | ||| || | | || ||| ||| | ||| ||||| |||||||| Sbjct 1504428 GACCTCTTCTTTGCCG------TGATTCTTTCTCAAGTTCAAGAAGTCAAAGACGTCAGC 1504375 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 ||||||||| |||||||||||||| | || ||| || ||| ||||| || || || Sbjct 1504374 GTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAAC 1504315 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 | || ||| || ||||| ||||| | ||| || |||||| | | || || || Sbjct 1504314 ATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATT 1504255 Query 139629 GGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCC 139685 || | | |||| | || | || || |||| | ||| |||||| |||||| || Sbjct 1504254 AGTACCAGAGATGTAGGAACCGGTG---GCACGGATGCAATGGGCATTGAGGCCGATACC 1504198 Query 139686 GCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGC 139744 ||| || ||||| || | | ||| || | | || ||||| || || |||| Sbjct 1504197 TCCGGCAGTCTTGGAGATCATGGCACAAATCTTG-AGGGTGTCGTAGATGCCCTCGATGC 1504139 Query 139745 TGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTG 139804 ||||||||| ||| || || ||||||||||| || || ||| | ||| || || Sbjct 1504138 TGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCAT 1504079 Query 139805 CAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCGTACGTTTCG 139863 || ||||| ||| ||||| || || || || | ||||| | | |||||| ||| Sbjct 1504078 TGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTT-CTGAGACATGAGGTTGTACGTCTCG 1504020 Query 139864 ATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 ||||| || ||| ||| ||||| ||||| || || || ||||| ||||| || || Sbjct 1504019 ATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCATGTGCTGA 1503960 Query 139924 ATCCGTTCGGCCAC-CGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 ||||| || || || | | || || ||| || |||| || |||||| | Sbjct 1503959 GGTCGTTCAGCGACTTGCTTGC-CAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAA 1503901 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||||| || ||||||||||| Sbjct 1503900 ACCAAAATATTGGTAGTTGAAATC 1503877 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 ||||||| |||||| || |||||| | || ||||||||| || || | || || | Sbjct 1110942 TGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCT 1111001 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 | |||| |||||| | ||||||||||| |||||| ||||||| | || ||||| | Sbjct 1111002 GGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCG 1111061 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT 126179 | || || | ||||| |||||||| || || Sbjct 1111062 ATGAGGGTATGCATACCGACTTTGCCTGCCT 1111092 >seq3 Length=4818847 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || |||||||| || || ||||| || ||||| ||| | | Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| |||||||| || ||||| ||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || || || |||||| |||| | || ||||| ||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||||||||| || | ||| | || |||| || || Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||| || || || ||| | | Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || || ||| Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || |||||||| ||| ||| | || ||||| ||| Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || |||||||| |||||| | || || || Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCGACTTCGTGGTGG 1795907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| | Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| ||||| || || || || || Sbjct 1796529 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 1796470 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || ||||| |||||| | | | || || || ||| Sbjct 1796469 CAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAAC 1796410 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || |||||||| || || || Sbjct 1796409 ATCCAGAAGGAATCTACTCTTCA 1796387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897532515360