Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 3e-14
>seq3
Length=4818847
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
||||| || || ||||| || |||||||||| ||||||||| | ||| || | | | |
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | | || || ||||| ||||| ||||| | ||| || ||
Sbjct 1796301 -GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCA 1796243
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||| | || || | || || || || || ||||||| ||||||| | | ||||||||
Sbjct 1796242 ACAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAA 1796183
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| || || ||||| || | || | ||| | ||||||||||| ||
Sbjct 1796182 CATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841539621916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |