Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 145 1e-28 seq5 136 6e-26 >seq2 Length=5110098 Score = 145 bits (160), Expect = 1e-28 Identities = 122/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||| |||||| | || || ||| | ||||| || ||||||||||||||||||||| Sbjct 1501124 AGGTGGACCAAGAGATGCTGTTCGAGATCATCCTGGCTGCCAACTACCTCGACATCAAGG 1501183 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 | || ||||| |||| |||||||||||||| ||| | |||||||||||||| || || | Sbjct 1501184 CTCTTCTCGACGTGGGCTGCAAGACCGTGGCAAACATGATCAAGGGCAAGTCACCAGAAG 1501243 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| |||||| || ||| Sbjct 1501244 AAATCCGCAAGACCTTCAACATCCAGAACG 1501273 Score = 95.1 bits (104), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| ||| Sbjct 4024990 GTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCAAGCTCACCGGGCAG 4025049 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || | |||| ||||||||| || |||| Sbjct 4025050 GATGAGTCTGACGGAGGTCTGGATTTCTCGGG 4025081 >seq5 Length=3814559 Score = 136 bits (150), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| || |||| ||| |||||||| |||||||| | || |||||||| Sbjct 1504323 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGA 1504264 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| || || || | | ||||| || | ||| || | || || | ||| Sbjct 1504263 GGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGCC 1504204 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | || || | || || || |||||||||||||| Sbjct 1504203 GATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTC 1504144 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| |||| ||||||| || | || ||||| ||||| || || | | ||| || Sbjct 1504143 GATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCC 1504084 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||||| ||||| Sbjct 1504083 AGCATTGAAGAGAGTGGG 1504066 Score = 86.0 bits (94), Expect = 1e-10 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078 ||||||||||| |||||||| || |||||||| ||| || |||||||||||||| Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATGCCGAGC 1111204 Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138 || || ||||| | ||| | | ||||| ||||||||| |||| ||| || ||| | Sbjct 1111203 AGGGCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGACG 1111144 Query 794139 A--TCTGC-CTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTA-GAGCAGGCA 794194 | ||| | || | | |||| |||||||| || || || | ||| ||||| Sbjct 1111143 ATGTCTTCAATGAG--CTTCGG-GTCCGGCTTGTGCTTCAG-ATGTTGCATGAGAAGGCA 1111088 Query 794195 GGCAAAGTCGCAATGCAGACC 794215 |||||||||| ||||| ||| Sbjct 1111087 GGCAAAGTCGGTATGCATACC 1111067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245123505268