Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 145 1e-28
seq5 136 6e-26
>seq2
Length=5110098
Score = 145 bits (160), Expect = 1e-28
Identities = 122/150 (81%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||| |||||| | || || ||| | ||||| || |||||||||||||||||||||
Sbjct 1501124 AGGTGGACCAAGAGATGCTGTTCGAGATCATCCTGGCTGCCAACTACCTCGACATCAAGG 1501183
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
| || ||||| |||| |||||||||||||| ||| | |||||||||||||| || || |
Sbjct 1501184 CTCTTCTCGACGTGGGCTGCAAGACCGTGGCAAACATGATCAAGGGCAAGTCACCAGAAG 1501243
Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| |||||| || |||
Sbjct 1501244 AAATCCGCAAGACCTTCAACATCCAGAACG 1501273
Score = 95.1 bits (104), Expect = 2e-13
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| |||
Sbjct 4024990 GTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCAAGCTCACCGGGCAG 4025049
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| || | |||| ||||||||| || ||||
Sbjct 4025050 GATGAGTCTGACGGAGGTCTGGATTTCTCGGG 4025081
>seq5
Length=3814559
Score = 136 bits (150), Expect = 6e-26
Identities = 185/258 (72%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| |||||||| || |||| ||| |||||||| |||||||| | || ||||||||
Sbjct 1504323 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGA 1504264
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||| || || || | | ||||| || | ||| || | || || | |||
Sbjct 1504263 GGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGCC 1504204
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||||||||| | || || | || || || ||||||||||||||
Sbjct 1504203 GATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTC 1504144
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||| ||||||| || | || ||||| ||||| || || | | ||| ||
Sbjct 1504143 GATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCC 1504084
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| |||||
Sbjct 1504083 AGCATTGAAGAGAGTGGG 1504066
Score = 86.0 bits (94), Expect = 1e-10
Identities = 144/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078
||||||||||| |||||||| || |||||||| ||| || ||||||||||||||
Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATGCCGAGC 1111204
Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138
|| || ||||| | ||| | | ||||| ||||||||| |||| ||| || ||| |
Sbjct 1111203 AGGGCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGACG 1111144
Query 794139 A--TCTGC-CTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTA-GAGCAGGCA 794194
| ||| | || | | |||| |||||||| || || || | ||| |||||
Sbjct 1111143 ATGTCTTCAATGAG--CTTCGG-GTCCGGCTTGTGCTTCAG-ATGTTGCATGAGAAGGCA 1111088
Query 794195 GGCAAAGTCGCAATGCAGACC 794215
|||||||||| ||||| |||
Sbjct 1111087 GGCAAAGTCGGTATGCATACC 1111067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245123505268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |