Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 6e-23
seq1 113 3e-20
seq6 100 2e-16
>seq3
Length=4818847
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| || |||||||| ||||| ||||| | | |||| ||||
Sbjct 1796378 AGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCC 1796437
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| |||||||| || ||||||||||| | || | || ||||||||
Sbjct 1796438 TCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 1796497
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| |||||| |||| || ||||||
Sbjct 1796498 TGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1796557
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| |||||||| || |||||||||||
Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|| ||||| ||||| |||||||||||||| ||||| || || || || | || ||||
Sbjct 1795921 CAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATC 1795980
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || ||||||| ||| || ||||| | || | |||||||||||
Sbjct 1795981 TTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC 1796040
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| | || || || | ||| || ||
Sbjct 1796041 TTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGT 1796100
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || ||||| ||||| || ||||| |||||
Sbjct 1796101 CTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 104 bits (114), Expect = 2e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | |||| ||||||||| ||||| ||||| ||| |||| ||||
Sbjct 1796606 AGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCT 1796665
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||| || || |||||||| || || |||||||| | || | || ||||||||
Sbjct 1796666 TCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 1796725
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||| || || | ||| ||||||
Sbjct 1796726 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTC 1796785
Query 34946 TTTCCCGTGA 34955
||||||||||
Sbjct 1796786 TTTCCCGTGA 1796795
>seq1
Length=6490813
Score = 113 bits (124), Expect = 3e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| ||| | || |||| || |||||||| ||||||||||
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||||||| |||||||| | || | || |||||||| | || || ||||||
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || | |||||| || | ||| |||||||| |||||||||||||| || |
Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539
Query 34968 AG 34969
||
Sbjct 4921538 AG 4921537
>seq6
Length=3558010
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||| ||| | ||| |||||| || ||||| ||||| || ||| |||| | ||
Sbjct 445096 CAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCGTC 445155
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| |||||||||||||| ||||||||||| | || | || ||||||||
Sbjct 445156 TTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTGTC 445215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692752367428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |