Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 122 6e-23 seq1 113 3e-20 seq6 100 2e-16 >seq3 Length=4818847 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| || |||||||| ||||| ||||| | | |||| |||| Sbjct 1796378 AGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCC 1796437 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| || ||||||||||| | || | || |||||||| Sbjct 1796438 TCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 1796497 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| |||||| |||| || |||||| Sbjct 1796498 TGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1796557 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||||| |||||||||||||| ||||| || || || || | || |||| Sbjct 1795921 CAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATC 1795980 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || ||||||| ||| || ||||| | || | ||||||||||| Sbjct 1795981 TTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC 1796040 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | ||| | || || || | ||| || || Sbjct 1796041 TTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGT 1796100 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| ||||| || ||||| ||||| Sbjct 1796101 CTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 1796606 AGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCT 1796665 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || |||||||| || || |||||||| | || | || |||||||| Sbjct 1796666 TCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 1796725 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||| || || | ||| |||||| Sbjct 1796726 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTC 1796785 Query 34946 TTTCCCGTGA 34955 |||||||||| Sbjct 1796786 TTTCCCGTGA 1796795 >seq1 Length=6490813 Score = 113 bits (124), Expect = 3e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| | || |||| || |||||||| |||||||||| Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||||||| |||||||| | || | || |||||||| | || || |||||| Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539 Query 34968 AG 34969 || Sbjct 4921538 AG 4921537 >seq6 Length=3558010 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||| ||| | ||| |||||| || ||||| ||||| || ||| |||| | || Sbjct 445096 CAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCGTC 445155 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| ||||||||||| | || | || |||||||| Sbjct 445156 TTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTGTC 445215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692752367428