Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 >seq3 Length=4818847 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || | || || | || || || ||||| ||||| || || ||||||| Sbjct 1796133 TACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAG 1796192 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || || || ||||| || || || ||||| || | ||||| || || | Sbjct 1796193 AGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGG 1796252 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| ||||| | || ||||| || || || || | ||| | Sbjct 1796253 GAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGA 1796312 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || |||||||| || | ||||| || || |||||||| Sbjct 1796313 CTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || ||||| ||||| || ||||| || || |||||||| ||| ||| || Sbjct 1795919 CGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCA 1795978 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || ||||||||||| | || ||||| || || || || || ||||| Sbjct 1795979 TCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTG 1796038 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| | || || || || || || ||| || ||| || |||| || ||| Sbjct 1796039 TCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATC 1796098 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || || ||||| Sbjct 1796099 GTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 96.9 bits (106), Expect = 7e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||||||||| ||||| || || || || | | | || || || || || Sbjct 1796387 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCCTCAAGCTGC 1796446 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||| ||||| || | ||| || || || || || |||||||| || || ||||| Sbjct 1796447 TTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 1796506 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || || || ||||| | | || || || | ||| || |||||||| || Sbjct 1796507 GACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTA 1796566 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 1796567 AGGGTCTTGACGAAGATCTGCAT 1796589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827049044068