Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 196 5e-45 seq1 123 2e-23 seq3 111 2e-19 >seq5 Length=3814559 Score = 196 bits (216), Expect = 5e-45 Identities = 1113/1750 (64%), Gaps = 61/1750 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGT-CGCTTTAT 148111 || ||| ||| || ||||| ||||| ||||| || ||||| | | | | | || Sbjct 1505582 GATTGGGACTGATCGATGAAAGCGCCTCGGTCGGCAGCCATCTGGAGAACAGCACGTTGG 1505523 Query 148112 CTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCG 148171 || ||||||||| | |||||||| || |||||||| | || ||| | |||| Sbjct 1505522 CTG-ATCTCCCAGACAGTCTTGTAGAGGGCCTTGATATCGGCCGGGATGTTGGGGATGTT 1505464 Query 148172 CTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAG 148231 ||| || ||||| | || || | || |||| ||| | ||| | | || || Sbjct 1505463 CTGGACAGAGCCACCGTCGGCGATGATGCGATTCTTCATGTTGTCGGACCAGAGACCAAG 1505404 Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 |||| |||||| | | || | | || || || || ||||| || || | ||| || Sbjct 1505403 GTCGACCAGGTCCTTCAGGAGCCATGGGTTGACGACTTGGAACTCACCAGCCAACACACG 1505344 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 ||| || | ||| || | || || || | |||||||||||||| ||||||| Sbjct 1505343 ACGCGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTTGCCCAAGATCTGCGA 1505284 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 || | ||| || |||||| || || || || |||||||| | |||| | || || Sbjct 1505283 AGTGGATGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACACCGTGTTTGGCAAT 1505224 Query 148412 TTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCG 148469 | | ||||| | |||| ||||| | || || || || || |||||||||||| Sbjct 1505223 CTCGGCCTTCAACGAATCCCAATCCCACA--GGTCACTGGGAGTGACATTCCACATGTCG 1505166 Query 148470 TACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 ||||| ||||| || | || || | |||||||| ||||| | || || || | | | Sbjct 1505165 TACTGAAGAATACC-CTGCGAGACTGGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTC 1505107 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | || |||||||| || || || ||| || || |||||| ||||| Sbjct 1505106 CTTTGCAAGTTCGCACGATGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGAC 1505047 Query 148589 GTTGAGCAGCGCCGCCGACTCGCT--TTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646 ||| || | | | | | || | ||| | || | |||||| | || || || Sbjct 1505046 GTTAAGTTG-TCGGGCTTC-CGGTGAATCGAAAGGAAGACGCAGAGCAAGGAAGGCATCT 1504989 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 ||||| || || || |||| |||| ||| ||||| | ||| | || ||| Sbjct 1504988 GCAAGACCTTGGACACCCAGACCAACGGGTCGGTGACGGAAATTGCTCTTTCTGGC-CTC 1504930 Query 148707 TCG-AGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | | ||||| | |||| ||||||||||||| ||||| ||||| || |||| | Sbjct 1504929 AGGCACGGGATAATAGTTGACGTCGATGATCTTGTTCAAG-TTGCGAGTGACAACCTGGG 1504871 Query 148765 T-AATTC-TG----CGCAGCAATTCAAAATCG-TACTTG--TCATCTACGATGCATCGGT 148815 | | ||| || || || ||| | ||| || | | || |||| | | || Sbjct 1504870 TGACTTCGTGAAGACGGCCGAAGTCATATTCGCCACGAGCCTGGTCCACGAAG-GTGGG- 1504813 Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875 | ||| | ||||| || ||||| ||||| |||||| ||||| || | || |||| Sbjct 1504812 -AAGGGCAAGGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGA 1504754 Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 | || | |||||| ||| || | |||| |||| |||||| || |||||||| ||| Sbjct 1504753 TTTCAGTGCACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGT 1504694 Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA 148995 |||| || |||||||| || ||||| || ||||| || ||| | || | | || Sbjct 1504693 TGCAAGCATCCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTG---TGCCTCGAGGA 1504637 Query 148996 AC-CG--ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTA-----GCGACCCTCCTGCTC 149047 | || ||| | ||| || |||| || || | ||| || || | ||| Sbjct 1504636 CCGCGTACCACAGCTTCTGGGC-----CTTGATGGTCTGACGCCCGCGGCCTTCTTTCTC 1504582 Query 149048 GTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107 |||| ||||| |||||| | || |||||| ||| ||||||| ||| | Sbjct 1504581 GTATTTCTCGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTC 1504522 Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167 ||| || || | || | ||| | || | | || |||||||| || ||||| || Sbjct 1504521 GTGGGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGG 1504462 Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227 |||||| || || | | |||||| || | ||||| ||| || | Sbjct 1504461 AGTCCAGAGGGCATAGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCT 1504402 Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287 || ||| | | | || | ||| |||||||| ||||| | || | || | || || Sbjct 1504401 CAAGTTCAAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 1504342 Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 ||| ||||| |||||||| || | ||| | ||||||| || || |||| ||| Sbjct 1504341 TGGACGCTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCAT 1504282 Query 149345 AGGTTCAATG---CCACTGGCAGTGCCGTTAGT---AGAGCT-AATGCGACTGCCGCGCG 149397 || |||| || ||| ||||| ||||| |||| | | | | | || || Sbjct 1504281 GGG---AATGAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACG 1504225 Query 149398 CTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGT 149457 ||| || ||| |||| |||||| || ||| | ||| ||||| || || Sbjct 1504224 GATGCA--ATGGGCA--TTGAGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAA 1504169 Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517 ||| || |||||||||||||||||||||| |||||| | || ||||| | Sbjct 1504168 TCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATG 1504109 Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577 | ||| || || | |||| || || ||| | ||||| |||||| ||||| Sbjct 1504108 ACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGC 1504049 Query 149578 ATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637 | ||||| ||| | | ||||| ||||| | || | || || || || || | Sbjct 1504048 ACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATAC 1503989 Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGA 149697 | | | || ||||| ||||| ||||| ||||| || || |||| || ||||| || | Sbjct 1503988 CAACCGACACACGCATGAGCATGTGCTGAGGTCGTTCAGCGACTTGCTTGCCAATCTTCA 1503929 Query 149698 GCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 ||| ||| | || || |||||| | ||||| || | ||||| || || || | | Sbjct 1503928 GCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAATCTCGATCAT 1503869 Query 149758 GGTCAATGGC 149767 | ||||||| Sbjct 1503868 AGACAATGGC 1503859 Score = 131 bits (144), Expect = 2e-25 Identities = 281/412 (68%), Gaps = 25/412 (6%) Strand=Plus/Minus Query 120466 AGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGC 120525 ||||| ||||| || || ||||| ||||||| ||| || ||||||||||| ||| Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATGCCGAGC 1111204 Query 120526 AACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAAC 120585 | || |||| || || | ||||||||||| || | || ||| | ||| Sbjct 1111203 AGGGCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGACG 1111144 Query 120586 ATGGC------GAGCATAGTGTGGCCGGGCATCTTGTG-TTC-GATGCGCGTTCGGTAGT 120637 ||| | |||| | | || |||| |||||| ||| |||| | | || Sbjct 1111143 ATGTCTTCAATGAGCTTCGGGT--CCGG----CTTGTGCTTCAGATGT---TGCATGAGA 1111093 Query 120638 ACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACG 120697 | |||| |||||||| || |||| ||||| ||||| || || ||||||||| |||| Sbjct 1111092 A--GGCAGGCAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACG 1111035 Query 120698 TCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAA 120757 |||| |||||||||| || || |||| | |||| |||| ||| ||| ||||| | Sbjct 1111034 TCAGACCGGGCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGA 1110975 Query 120758 AGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC 120817 |||| | ||| || || || || ||||||| || | ||| || ||| | |||| Sbjct 1110974 AGAAGATGCCTTCGACAGCAGCGAACGCGACCAGTCGTTGGGCGAAGCTCGAC-TCTT-- 1110918 Query 120818 TGTC---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 |||| |||||||||||| ||||| || || || ||||| | ||| || || Sbjct 1110917 TGTCCGCGATCCACTTCATTGCCCAATCAGCTTTCTTGCGGATGCAGGGAAT 1110866 >seq1 Length=6490813 Score = 123 bits (136), Expect = 2e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || || | | | ||||| || |||||||| ||| | || Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCA-TCCTCAAGTTGCTTGCCGGCGAAGAT 4921658 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || |||||||||||||||||||||||||||||||| |||||| ||||| | || Sbjct 4921657 CAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTC 4921598 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||||| | ||| || |||| ||||| ||| ||||| || || || || ||||| Sbjct 4921597 GATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 4921538 >seq3 Length=4818847 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| |||| || ||| | | | ||||| |||||||| || Sbjct 1796393 GTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCA-TCCTCAAGCTGCTTTCC 1796451 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || |||||||| || || |||||||||||||| |||||| ||| Sbjct 1796452 AGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTT 1796511 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| ||| ||| || || | |||| ||| ||||| || || || Sbjct 1796512 GACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGT 1796571 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1796572 CTTGACGAAGATCTGCAT 1796589 Score = 102 bits (112), Expect = 8e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| |||| || ||| | | | || ||||| Sbjct 1796612 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCTTCGAG 1796670 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || ||| | || || ||||||||||| ||||| |||||||||||||| || Sbjct 1796671 TTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAAT 1796730 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || ||| ||| ||| || |||| ||||| ||| || || Sbjct 1796731 CTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTTCC 1796790 Query 133634 GGT 133636 || Sbjct 1796791 CGT 1796793 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || |||||||| ||| | || || ||||| |||||||| || || ||||||||| Sbjct 1796207 TCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTG 1796266 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | || || || | ||| | | Sbjct 1796267 TCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATG 1796326 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || || ||||| |||||||| Sbjct 1796327 GTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420727486880