Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 2e-37
seq3 93.3 4e-14
>seq5
Length=3814559
Score = 170 bits (188), Expect = 2e-37
Identities = 610/948 (64%), Gaps = 7/948 (1%)
Strand=Plus/Minus
Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525
|| || || ||||| ||||| ||| || | | | || | | |||||||| | ||||
Sbjct 1504802 GAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGCAC 1504743
Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCT 147585
|||||| || | || ||||| || | ||| ||||| ||| ||||| || ||
Sbjct 1504742 AGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 1504683
Query 147586 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAG 147644
||| |||| ||||| || || |||||| || | || | || | || |||
Sbjct 1504682 TTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCG-CGTACCACAG 1504624
Query 147645 GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCG 147704
| ||| || | ||| || |||||| || || ||||| ||||||||
Sbjct 1504623 CTTCTGGGCCTTGATGGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCTCGTACAGGGC 1504564
Query 147705 CTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGA 147764
||| || ||||| |||||| ||||| || || || | || ||||| | ||| |
Sbjct 1504563 CTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGACAGAACAGAGT 1504504
Query 147765 CCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACAT 147824
||| | || | | || || ||| || |||||||| ||| || || || |
Sbjct 1504503 CCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGAA 1504444
Query 147825 AAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT-TCAAATTAAGCACGCTAT 147883
| ||||| ||| | || || ||| || | | || |||| || | | | |
Sbjct 1504443 CAAGTCGCGTGCTCGGACCTCTTCTTTGCCG-TGATTCTTTCTCAAGTTCAAGAAGTCAA 1504385
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
||| ||| |||||||| || || | |||| ||| | |||||| |||||| || |
Sbjct 1504384 AGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCAC 1504325
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
||||||| |||| ||| | ||||||| || ||||| | |||||| || ||| | |
Sbjct 1504324 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGG 1504265
Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060
||||| || || | ||| | | ||| ||| || | || | || | ||
Sbjct 1504264 AGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGC 1504205
Query 148061 CAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGT 148120
| || || ||| | ||| || || || ||| | || ||||||||| |
Sbjct 1504204 CGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCT 1504145
Query 148121 CGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTC 148180
|||||||||||| || | | | ||| || || || ||| || || ||||||
Sbjct 1504144 CGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTC 1504085
Query 148181 CCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACG 148240
| || ||| || |||||| ||||| ||||| | || ||| ||| | | ||||
Sbjct 1504084 CAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACG 1504025
Query 148241 TCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGT 148300
|||| || || | || | ||||| |||||||| || | || || |||||||||||||
Sbjct 1504024 TCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCATGT 1503965
Query 148301 GCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTT 148360
|||| |||||||| || ||||| ||| ||||| || || ||| | || || || |
Sbjct 1503964 GCTGAGGTCGTTCAGCGACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCT 1503905
Query 148361 TGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|| ||||||| || | ||| | |||||| | || || | |||||||
Sbjct 1503904 TGAAACCAAAATATTGGTAGTTGAAATCTCGATCATAGACAATGGCCG 1503857
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 46761 CCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACG 46820
|| ||| | ||||| || || | ||||| ||||||||||||| | | | | | | |
Sbjct 1110869 CCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG-GACAAAGAGTCGAG 1110927
Query 46821 C-TGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTT 46879
| | ||| | || |||| || ||||| ||||||||| | || || ||||| ||
Sbjct 1110928 CTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTCCTT 1110987
Query 46880 TGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGA 46939
||| |||| || | | || | ||| || | ||||| || ||||||||| |||||
Sbjct 1110988 CGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAACGA 1111047
Query 46940 GTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984
| | ||||| ||||| || || | || || |||||||| || ||
Sbjct 1111048 GCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCT 1111092
>seq3
Length=4818847
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || |||||||||||||||| ||| || |||||||
Sbjct 1796609 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1796668
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
|| |||||||| | |||| || ||||| || || ||||| |||||||| || ||
Sbjct 1796669 AGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 1796724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611128508320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |