Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 170 2e-37 seq3 93.3 4e-14 >seq5 Length=3814559 Score = 170 bits (188), Expect = 2e-37 Identities = 610/948 (64%), Gaps = 7/948 (1%) Strand=Plus/Minus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525 || || || ||||| ||||| ||| || | | | || | | |||||||| | |||| Sbjct 1504802 GAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGCAC 1504743 Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCT 147585 |||||| || | || ||||| || | ||| ||||| ||| ||||| || || Sbjct 1504742 AGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 1504683 Query 147586 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAG 147644 ||| |||| ||||| || || |||||| || | || | || | || ||| Sbjct 1504682 TTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCG-CGTACCACAG 1504624 Query 147645 GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCG 147704 | ||| || | ||| || |||||| || || ||||| |||||||| Sbjct 1504623 CTTCTGGGCCTTGATGGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCTCGTACAGGGC 1504564 Query 147705 CTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGA 147764 ||| || ||||| |||||| ||||| || || || | || ||||| | ||| | Sbjct 1504563 CTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGACAGAACAGAGT 1504504 Query 147765 CCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACAT 147824 ||| | || | | || || ||| || |||||||| ||| || || || | Sbjct 1504503 CCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGAA 1504444 Query 147825 AAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT-TCAAATTAAGCACGCTAT 147883 | ||||| ||| | || || ||| || | | || |||| || | | | | Sbjct 1504443 CAAGTCGCGTGCTCGGACCTCTTCTTTGCCG-TGATTCTTTCTCAAGTTCAAGAAGTCAA 1504385 Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 ||| ||| |||||||| || || | |||| ||| | |||||| |||||| || | Sbjct 1504384 AGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCAC 1504325 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 ||||||| |||| ||| | ||||||| || ||||| | |||||| || ||| | | Sbjct 1504324 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGG 1504265 Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 ||||| || || | ||| | | ||| ||| || | || | || | || Sbjct 1504264 AGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGAGGC 1504205 Query 148061 CAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGT 148120 | || || ||| | ||| || || || ||| | || ||||||||| | Sbjct 1504204 CGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCT 1504145 Query 148121 CGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTC 148180 |||||||||||| || | | | ||| || || || ||| || || |||||| Sbjct 1504144 CGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTC 1504085 Query 148181 CCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACG 148240 | || ||| || |||||| ||||| ||||| | || ||| ||| | | |||| Sbjct 1504084 CAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACG 1504025 Query 148241 TCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGT 148300 |||| || || | || | ||||| |||||||| || | || || ||||||||||||| Sbjct 1504024 TCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCATGT 1503965 Query 148301 GCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTT 148360 |||| |||||||| || ||||| ||| ||||| || || ||| | || || || | Sbjct 1503964 GCTGAGGTCGTTCAGCGACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCT 1503905 Query 148361 TGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 || ||||||| || | ||| | |||||| | || || | ||||||| Sbjct 1503904 TGAAACCAAAATATTGGTAGTTGAAATCTCGATCATAGACAATGGCCG 1503857 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 46761 CCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACG 46820 || ||| | ||||| || || | ||||| ||||||||||||| | | | | | | | Sbjct 1110869 CCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG-GACAAAGAGTCGAG 1110927 Query 46821 C-TGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTT 46879 | | ||| | || |||| || ||||| ||||||||| | || || ||||| || Sbjct 1110928 CTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTCCTT 1110987 Query 46880 TGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGA 46939 ||| |||| || | | || | ||| || | ||||| || ||||||||| ||||| Sbjct 1110988 CGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAACGA 1111047 Query 46940 GTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 | | ||||| ||||| || || | || || |||||||| || || Sbjct 1111048 GCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCT 1111092 >seq3 Length=4818847 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||||||| ||| || ||||||| Sbjct 1796609 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1796668 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || |||||||| | |||| || ||||| || || ||||| |||||||| || || Sbjct 1796669 AGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 1796724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611128508320