Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 seq3 98.7 1e-15 seq1 96.9 4e-15 >seq5 Length=3814559 Score = 116 bits (128), Expect = 4e-21 Identities = 291/438 (66%), Gaps = 13/438 (3%) Strand=Plus/Plus Query 7551 CGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACAT 7610 ||| |||||| ||| |||||||| |||| ||| |||| || |||||||| || || | Sbjct 1503948 CGCTGAACGACCTCAGCACATGCTCATGCGTGTGTCGGTTGGTATTCACGGGGACGATGT 1504007 Query 7611 TGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCC 7670 ||| ||| | || |||||| | | |||||| ||| ||||| ||||| || || Sbjct 1504008 TGAGAAGGCCATCGAGACGTACAACCTCATGTCTCAGAAGTGCTTTACTCACGCCTCTCC 1504067 Query 7671 CACCATGTTTGCCGCGGGCACAAACGCG----CCTCAATTGTCCTCGTGTTTTTTGCTAA 7726 ||| | || || || ||||| || || |||| || || || ||| | Sbjct 1504068 CACTCTCTTCAATGCTGG----AACGCCTCAACCCCAGCTGTCGTCATGCTTCTTGATCG 1504123 Query 7727 CCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATT 7785 ||| || ||||||||||| ||||| ||| |||| || | || ||| |||| || Sbjct 1504124 ATATGAAGGACGACAGCATCGAGGGCATCTACGACACCCT-CAAGATTTGTGCCATGATC 1504182 Query 7786 TCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGC 7845 ||||| | ||| || || || || || | | | | || |||| |||| | | Sbjct 1504183 TCCAAGACTGCCGGAGGTATCGGCCTCAATGCCCATTGCATCCGTGCCACCGGTTCCTAC 1504242 Query 7846 ATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAAC 7905 ||| || || || | ||| |||| | |||||| | ||||| ||||| ||| Sbjct 1504243 ATCTCTGGTACTAATGGCACCTCCAACGGTCTCATTCCCATGCTTCGCGTCTTCAACAAC 1504302 Query 7906 GCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTG 7962 | | || |||| |||||||| || ||||| ||| ||| |||||||||| || Sbjct 1504303 ACTGCTCGCTATGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTATCTG 1504362 Query 7963 GAGCCGTGGCACGCGGAC 7980 ||||| |||||||| ||| Sbjct 1504363 GAGCCATGGCACGCTGAC 1504380 >seq3 Length=4818847 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || |||||||| || ||||||||||||| Sbjct 1796363 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1796422 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || || | ||| ||||| || || || Sbjct 1796423 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGA 1796482 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | || ||| || || || Sbjct 1796483 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1796542 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || | || || ||||| || ||||| Sbjct 1796543 TCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||| ||||| || ||||||||||||| Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || ||||| ||||| ||||| || || | |||||||| || || || Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || ||||| ||| | || ||| || || || Sbjct 1796711 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 1796770 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 1796771 TCGAGGGTGATGGTCTTTCCCGT 1796793 >seq1 Length=6490813 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||||| | ||| | || || || || ||||| || || | Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| ||||| || |||||||| || || || || || ||||| || Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||||| || || ||||| || ||||| || || || | || || |||| Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539 Query 134704 A 134704 | Sbjct 4921538 A 4921538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398324190240