Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 4e-21
seq3 98.7 1e-15
seq1 96.9 4e-15
>seq5
Length=3814559
Score = 116 bits (128), Expect = 4e-21
Identities = 291/438 (66%), Gaps = 13/438 (3%)
Strand=Plus/Plus
Query 7551 CGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACAT 7610
||| |||||| ||| |||||||| |||| ||| |||| || |||||||| || || |
Sbjct 1503948 CGCTGAACGACCTCAGCACATGCTCATGCGTGTGTCGGTTGGTATTCACGGGGACGATGT 1504007
Query 7611 TGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCC 7670
||| ||| | || |||||| | | |||||| ||| ||||| ||||| || ||
Sbjct 1504008 TGAGAAGGCCATCGAGACGTACAACCTCATGTCTCAGAAGTGCTTTACTCACGCCTCTCC 1504067
Query 7671 CACCATGTTTGCCGCGGGCACAAACGCG----CCTCAATTGTCCTCGTGTTTTTTGCTAA 7726
||| | || || || ||||| || || |||| || || || ||| |
Sbjct 1504068 CACTCTCTTCAATGCTGG----AACGCCTCAACCCCAGCTGTCGTCATGCTTCTTGATCG 1504123
Query 7727 CCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATT 7785
||| || ||||||||||| ||||| ||| |||| || | || ||| |||| ||
Sbjct 1504124 ATATGAAGGACGACAGCATCGAGGGCATCTACGACACCCT-CAAGATTTGTGCCATGATC 1504182
Query 7786 TCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGC 7845
||||| | ||| || || || || || | | | | || |||| |||| | |
Sbjct 1504183 TCCAAGACTGCCGGAGGTATCGGCCTCAATGCCCATTGCATCCGTGCCACCGGTTCCTAC 1504242
Query 7846 ATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAAC 7905
||| || || || | ||| |||| | |||||| | ||||| ||||| |||
Sbjct 1504243 ATCTCTGGTACTAATGGCACCTCCAACGGTCTCATTCCCATGCTTCGCGTCTTCAACAAC 1504302
Query 7906 GCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTG 7962
| | || |||| |||||||| || ||||| ||| ||| |||||||||| ||
Sbjct 1504303 ACTGCTCGCTATGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTATCTG 1504362
Query 7963 GAGCCGTGGCACGCGGAC 7980
||||| |||||||| |||
Sbjct 1504363 GAGCCATGGCACGCTGAC 1504380
>seq3
Length=4818847
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || |||||||| || |||||||||||||
Sbjct 1796363 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1796422
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| || || || || || | ||| ||||| || || ||
Sbjct 1796423 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGA 1796482
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| ||| | || ||| || || ||
Sbjct 1796483 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1796542
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || || || | || || ||||| || |||||
Sbjct 1796543 TCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || ||||| ||||| || |||||||||||||
Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || ||||| ||||| ||||| || || | |||||||| || || ||
Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || ||||| || ||||| ||| | || ||| || || ||
Sbjct 1796711 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 1796770
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || || ||
Sbjct 1796771 TCGAGGGTGATGGTCTTTCCCGT 1796793
>seq1
Length=6490813
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||||| | ||| | || || || || ||||| || || |
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| ||||| || |||||||| || || || || || ||||| ||
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||||| || || ||||| || ||||| || || || | || || ||||
Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539
Query 134704 A 134704
|
Sbjct 4921538 A 4921538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398324190240
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