Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 140 4e-28 >seq5 Length=3814559 Score = 140 bits (154), Expect = 4e-28 Identities = 402/610 (66%), Gaps = 10/610 (2%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 || || ||||| || ||||| ||| |||| || || ||| || | || | | || Sbjct 1504484 ACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGC-ATAGAACAAGTCGCGTGCTCGGAC 1504426 Query 69654 TTCTTCATTTCCTGTAtttttttt-AAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712 ||||| || || ||| ||| | ||| || |||| || | | |||| ||||||| Sbjct 1504425 CTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAG-TCAAAGACGTCAGCGTGCCATG 1504367 Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGG 69772 | || ||||| || || | | | || || || || || || ||||| || | || | | Sbjct 1504366 GCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAG 1504307 Query 69773 CAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAG 69832 ||||||| || |||| | ||||| ||||| | ||| || || | ||||| || |||| Sbjct 1504306 CAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAG 1504247 Query 69833 AAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890 | || || || | || || || | | || || | || || ||||| || | Sbjct 1504246 AGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGA--GGCCGATACCTCCGGCAGT 1504189 Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 || ||||| | |||||| || | ||||| || || ||||| ||||| || || | Sbjct 1504188 CTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTT 1504129 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 ||| | | | || || |||| || | || ||||| ||||| || | || Sbjct 1504128 CATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGT 1504069 Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070 ||||| |||||||| || || || | ||| | || ||||| || || || || || Sbjct 1504068 GGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTC 1504009 Query 70071 TATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 70130 | ||| | ||||| || | || |||||||| | ||| |||||||||||||| | Sbjct 1504008 AACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCATGTGCTGAGGTCGTTCAGC 1503949 Query 70131 CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTT 70190 || || || |||| |||||||||| | ||||| || || || |||||||| | Sbjct 1503948 GACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTG 1503889 Query 70191 GTA--TGAAA 70198 ||| ||||| Sbjct 1503888 GTAGTTGAAA 1503879 Score = 96.9 bits (106), Expect = 5e-15 Identities = 176/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| ||| | |||||||| | | || | ||||| || || || || Sbjct 1111090 GCAGGCAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAG 1111031 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| | || | ||| || |||| || || || || || ||||| Sbjct 1111030 ACCGGGCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAA 1110971 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792 ||||||||| || || || || || || |||| | || | || | || || | Sbjct 1110970 GATGCCTTCGACAGCAGCGAACGCGACCAGTCGTTGGGCGAAGCTCGACTCTTTGTCCGC 1110911 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||||||| |||||||||||||||||| | || || ||||| || || |||| Sbjct 1110910 GATCCACTTCATTGCCCAATCAGCTTTCTTGCGGATGCAGGGAATTGTGTCAATGGCATC 1110851 Query 39853 AAAGAGATAATGTTTT 39868 || |||| ||||||| Sbjct 1110850 GAACAGAT-ATGTTTT 1110836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908696963680