Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 4e-28
>seq5
Length=3814559
Score = 140 bits (154), Expect = 4e-28
Identities = 402/610 (66%), Gaps = 10/610 (2%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653
|| || ||||| || ||||| ||| |||| || || ||| || | || | | ||
Sbjct 1504484 ACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGC-ATAGAACAAGTCGCGTGCTCGGAC 1504426
Query 69654 TTCTTCATTTCCTGTAtttttttt-AAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712
||||| || || ||| ||| | ||| || |||| || | | |||| |||||||
Sbjct 1504425 CTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAG-TCAAAGACGTCAGCGTGCCATG 1504367
Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGG 69772
| || ||||| || || | | | || || || || || || ||||| || | || | |
Sbjct 1504366 GCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAG 1504307
Query 69773 CAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAG 69832
||||||| || |||| | ||||| ||||| | ||| || || | ||||| || ||||
Sbjct 1504306 CAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAG 1504247
Query 69833 AAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890
| || || || | || || || | | || || | || || ||||| || |
Sbjct 1504246 AGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGA--GGCCGATACCTCCGGCAGT 1504189
Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950
|| ||||| | |||||| || | ||||| || || ||||| ||||| || || |
Sbjct 1504188 CTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTT 1504129
Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010
||| | | | || || |||| || | || ||||| ||||| || | ||
Sbjct 1504128 CATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGT 1504069
Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070
||||| |||||||| || || || | ||| | || ||||| || || || || ||
Sbjct 1504068 GGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTC 1504009
Query 70071 TATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 70130
| ||| | ||||| || | || |||||||| | ||| |||||||||||||| |
Sbjct 1504008 AACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCATGTGCTGAGGTCGTTCAGC 1503949
Query 70131 CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTT 70190
|| || || |||| |||||||||| | ||||| || || || |||||||| |
Sbjct 1503948 GACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTG 1503889
Query 70191 GTA--TGAAA 70198
||| |||||
Sbjct 1503888 GTAGTTGAAA 1503879
Score = 96.9 bits (106), Expect = 5e-15
Identities = 176/256 (69%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| ||| | |||||||| | | || | ||||| || || || ||
Sbjct 1111090 GCAGGCAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAG 1111031
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||| | || | ||| || |||| || || || || || |||||
Sbjct 1111030 ACCGGGCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAA 1110971
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792
||||||||| || || || || || || |||| | || | || | || || |
Sbjct 1110970 GATGCCTTCGACAGCAGCGAACGCGACCAGTCGTTGGGCGAAGCTCGACTCTTTGTCCGC 1110911
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
||||||||| |||||||||||||||||| | || || ||||| || || ||||
Sbjct 1110910 GATCCACTTCATTGCCCAATCAGCTTTCTTGCGGATGCAGGGAATTGTGTCAATGGCATC 1110851
Query 39853 AAAGAGATAATGTTTT 39868
|| |||| |||||||
Sbjct 1110850 GAACAGAT-ATGTTTT 1110836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908696963680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |