Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 170 6e-37 seq3 158 4e-33 seq1 132 1e-25 seq6 107 6e-18 >seq5 Length=3814559 Score = 170 bits (188), Expect = 6e-37 Identities = 723/1132 (64%), Gaps = 15/1132 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 || ||||||| |||||| | || || || || || ||||| | | | | | |||| | Sbjct 3179030 CCTCTATAGGTATCGATCTGGGCACGACCTACTCGTGTGTCGGCATCTTCCGAGATGACC 3178971 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | || || || || || || || || ||| |||| || || || | || || || | Sbjct 3178970 GTATCGAGATTATCGCCAACGACCAGGGCAACCGAACCACCCCGTCCTTTGTGGCTTTCA 3178911 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || ||||| |||| |||||| | ||||| || || | || || || | | Sbjct 3178910 CAGACACCGAGCGCCTGATCGGTGATGCCGCAAAGAACCAGGTCGCCATGAACCCTCAGA 3178851 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || || || || || |||||||| || ||| | | || | || | | | || Sbjct 3178850 ACACTGTCTTCGACGCCAAGCGACTGATCGGTCGCAAATTCGCCGATGCTGAGGTCCAGG 3178791 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || | || ||||| || || | | ||| || | ||| || || | || Sbjct 3178790 --CCGACATGAAGCATTTCCCCTTCAAGATCGTTGACAAGGCCGGC---AAGCCCGTCAT 3178736 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||| || | || || || | || || ||| |||||||| || ||||| ||||| Sbjct 3178735 CGAGGTGGAGTTCAAGGGAGAGAACAAGCAGTTTACCCCCGAAGAGATCTCATCCATGGT 3178676 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || || ||| || | || || ||||| | |||| ||||| | | ||||| Sbjct 3178675 CTTGACCAAGATGCGAGAGACCGCAGAGTCATATCTTGGTGGCACAGTCAACAACGCTGT 3178616 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | ||||| || ||||| || || ||| | |||||| || || |||||||| || Sbjct 3178615 CGTCACTGTCCCCGCCTACTTCAACGATTCTCAGCGTCAAGCTACCAAAGATGCCGGTCT 3178556 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | ||||| || | || || || || || || || ||||| || || || Sbjct 3178555 GATCGCTGGCCTCAATGTCCTCCGTATCATCAACGAGCCGACCGCCGCAGCCATCGCCTA 3178496 Query 349735 TGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 ||| || || || || || || || || |||| || || ||| | ||||||| Sbjct 3178495 TGGTCTCGACAAGAAAGAA-GAGGGCGAGCGCAACGTTCTCATCTTCGATCTTGGTGGTG 3178437 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853 |||| || ||||| || || | || | ||||| |||||||||||||| || | || | Sbjct 3178436 GTACCTTCGATGTCTCCCTCTTGACCATCGAAGAAGGAATTTTTGAAGTCAAGTCGACCG 3178377 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 | ||||| || || | ||||| || ||||| || || | ||||| || || || Sbjct 3178376 CCGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACAGACTCGTCAATCACTTCGTCT 3178317 Query 349914 AAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGC 349972 || || || ||| |||| || | || | | || | | || | || || Sbjct 3178316 CTGAGTTCAAACGT-AAGCACAAGAAGGACCTCAGCACCAACGCCCGTGCTCTTCGACGT 3178258 Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032 || | || || ||||| || || ||||| || | || || | | || || || || Sbjct 3178257 CTCCGGACCGCCTGTGAGCGAGCCAAGCGCACCCTGTCTTCGTCCGCGCAGACTTCCATC 3178198 Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 ||||| || ||||| ||| || | || |||| | || || || || || || || Sbjct 3178197 GAAATCGACTCTCTCTATGAGGGTATCGACTTCTACACCTCCATCACCCGCGCCCGATTC 3178138 Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152 || || | || |||||| || || | || ||||| ||||| || || | Sbjct 3178137 GAGGAGCTGTGCCAGGATCTCTTCCGATCTACCATGGAGCCTGTCGAGCGTGTCCTCCGC 3178078 Query 350153 GATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 ||||| || | || | || || | || | || | || || || || || || || | Sbjct 3178077 GATGCCAAGA--TCGACAAGTCCTCGGTTCACGAGATCGTCTTGGTCGGAGGATCCACCC 3178020 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270 |||| || | | | || || | | || || || || || ||||| || || | | Sbjct 3178019 GTATCCCCAGAATCCAGAAGCTTGTCTCCGACTTCTTCAACGGCAAGGAGCCCAACAAGT 3177960 Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | || || || ||||| || || || || ||||| || || ||||| |||| Sbjct 3177959 CGATCAACCCCGATGAGGCCGTCGCCTACGGTGCCGCCGTCCAGGCTGCTAT 3177908 >seq3 Length=4818847 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | ||| || |||||||| || || || || || || || || | Sbjct 1796127 TTTGCATACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGT 1796186 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | ||||| ||||| |||||||| || || || ||||| || || || || | Sbjct 1796187 AATCAGAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGT 1796246 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||||||||| || || || || || | || ||||| || || | || || | Sbjct 1796247 CGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACG 1796306 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || |||| ||||| |||||||| || || || || |||||||| Sbjct 1796307 ATTCGACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 141 bits (156), Expect = 3e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || |||||||||||||| || || || || || || || Sbjct 1796359 CATACCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTC 1796418 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || ||||| ||||| || |||||||| ||||| ||||||||||| ||||| Sbjct 1796419 GCTCAAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGG 1796478 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||||| ||||| || ||||| || || | || || || || || | ||| | ||| | Sbjct 1796479 GGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATC-GCTGGACT 1796537 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| || | ||||| || || || || || || || |||||||| Sbjct 1796538 CGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 120 bits (132), Expect = 9e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 140504 TTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 |||| ||||||||| | || | || |||| |||||||| ||| || || || || | Sbjct 1795900 TTACTGACCACCACGAAGTCGCAAGACCAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGT 1795958 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | ||||| |||||||| || || || ||||||||||| | || || || | Sbjct 1795959 AATCAGAGAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGT 1796018 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| || || || || || || || | || || || || || | ||||| | Sbjct 1796019 CAGGGGGAATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAG 1796078 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || |||| ||||| || || || || || || || || ||||| Sbjct 1796079 ATTCCACCTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 109 bits (120), Expect = 2e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || || || || || Sbjct 1796587 CATACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1796646 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || |||||||| |||||||| || || ||||| || || ||||| ||||| Sbjct 1796647 GCTCAGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGG 1796706 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 |||||| ||||| || |||||||| || | || || || || || | ||| | ||| | Sbjct 1796707 AGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATC-GCTGGACT 1796765 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 |||| || || || | |||||||| || | ||| Sbjct 1796766 CAACCTCGAGGGTGATGGTCTTTCCCGTGACTGT 1796799 >seq1 Length=6490813 Score = 132 bits (146), Expect = 1e-25 Identities = 244/357 (68%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| | || | ||| |||| | || ||||||||| |||| || ||||| | Sbjct 5493128 CCTGAAGAGGTCTCGGCCATGATTTTGGGCAAGATGAAGGAAGTTGCAGAGGCATACCTG 5493069 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || | || ||| | || || ||||||||||| || || || ||||| Sbjct 5493068 GGCAAGAAAGTGACCCACGCCGTTGTGACGGTTCCAGCCTATTTCAACGACGCACAGCGA 5493009 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| |||| |||||||| || ||||| | || | || || Sbjct 5493008 CAGGCCACCAAGGATGCCGGCACGATTGCGGGCTTGGTCGTTCTTCGTGTGGTCAACGAG 5492949 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || || || || || ||||| || || | | | || | | ||| Sbjct 5492948 CCGACGGCCGCGGCCATCGCCTACGGTCTTGACAA---GAAGGGCAAGGAGAGCCAGATT 5492892 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | ||| | |||||||||||||| ||||| || || || | |||| || || Sbjct 5492891 ATTGTCTACGATCTCGGTGGTGGTACTTTCGATGTCTCCCTCCTCTCTATTGAGGATGGT 5492832 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 |||| || || || || |||||||| || ||||||||||| || ||||| ||| Sbjct 5492831 GTTTTCGAGGTCTTGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGAT 5492775 >seq6 Length=3558010 Score = 107 bits (118), Expect = 6e-18 Identities = 221/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179 ||||| || || || ||||| |||||||||||| || | | || || || || Sbjct 1825124 ATCAAGGCCGTCCTCCCCATAGATGAATTGAACAATGTTGCCGCGAGAGTCTCGGACCGT 1825183 Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239 | ||||| | || | | ||||| | || || | ||||| || || ||||| Sbjct 1825184 GCTGTCATACTTGACAGTCACCTCTTCAAGAGCCTTGACCAGTCGGCGCTGGATGTAACC 1825243 Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299 ||| | || || ||||| || ||||| | ||| |||||||| |||| || ||||| Sbjct 1825244 AGTCTCGGCGGTCTTGACTGCTGTGTCAATAAGACCTTCACGACCAGCCATGGCGTGGAA 1825303 Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359 ||| |||||||| ||||| || |||| || | |||| |||| | ||| |||| | Sbjct 1825304 GAAGAATTCAGTCGGAGTTAGACCACGAAGATATGAGTTCTCCACAAAGCCTCGAGAAGG 1825363 Query 378360 TGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAAT 378419 | |||| ||||| |||| | | || || | || |||| || || || | ||||| Sbjct 1825364 AGCGGAATAATCATCCTTTGCAAAGTGCGGAAGAGTGCGATACTTGAAGCCGAACGGAAT 1825423 Query 378420 TCGTTTTCCATCAACATTCTGTTGACCAA 378448 ||||| || || || |||||||||| Sbjct 1825424 GCGTTTGCCTTCGACGGCTTGTTGACCAA 1825452 Score = 84.2 bits (92), Expect = 7e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | || || || ||||| ||||| || || || || || Sbjct 445082 CCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 445141 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || ||||| ||||| || || || ||||| || |||||||| || |||||| Sbjct 445142 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 445201 Query 140631 ATTCCTTCTTTATC 140644 |||||||| || || Sbjct 445202 ATTCCTTCCTTGTC 445215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254167029636