Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 6e-37
seq3 158 4e-33
seq1 132 1e-25
seq6 107 6e-18
>seq5
Length=3814559
Score = 170 bits (188), Expect = 6e-37
Identities = 723/1132 (64%), Gaps = 15/1132 (1%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|| ||||||| |||||| | || || || || || ||||| | | | | | |||| |
Sbjct 3179030 CCTCTATAGGTATCGATCTGGGCACGACCTACTCGTGTGTCGGCATCTTCCGAGATGACC 3178971
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
|| | || || || || || || || || ||| |||| || || || | || || || |
Sbjct 3178970 GTATCGAGATTATCGCCAACGACCAGGGCAACCGAACCACCCCGTCCTTTGTGGCTTTCA 3178911
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
| || || ||||| |||| |||||| | ||||| || || | || || || | |
Sbjct 3178910 CAGACACCGAGCGCCTGATCGGTGATGCCGCAAAGAACCAGGTCGCCATGAACCCTCAGA 3178851
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434
| || || || || || |||||||| || ||| | | || | || | | | ||
Sbjct 3178850 ACACTGTCTTCGACGCCAAGCGACTGATCGGTCGCAAATTCGCCGATGCTGAGGTCCAGG 3178791
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
| || | || ||||| || || | | ||| || | ||| || || | ||
Sbjct 3178790 --CCGACATGAAGCATTTCCCCTTCAAGATCGTTGACAAGGCCGGC---AAGCCCGTCAT 3178736
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
||||| || | || || || | || || ||| |||||||| || ||||| |||||
Sbjct 3178735 CGAGGTGGAGTTCAAGGGAGAGAACAAGCAGTTTACCCCCGAAGAGATCTCATCCATGGT 3178676
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
|| || ||| || | || || ||||| | |||| ||||| | | |||||
Sbjct 3178675 CTTGACCAAGATGCGAGAGACCGCAGAGTCATATCTTGGTGGCACAGTCAACAACGCTGT 3178616
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
| ||||| || ||||| || || ||| | |||||| || || |||||||| ||
Sbjct 3178615 CGTCACTGTCCCCGCCTACTTCAACGATTCTCAGCGTCAAGCTACCAAAGATGCCGGTCT 3178556
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|| || || | ||||| || | || || || || || || || ||||| || || ||
Sbjct 3178555 GATCGCTGGCCTCAATGTCCTCCGTATCATCAACGAGCCGACCGCCGCAGCCATCGCCTA 3178496
Query 349735 TGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793
||| || || || || || || || || |||| || || ||| | |||||||
Sbjct 3178495 TGGTCTCGACAAGAAAGAA-GAGGGCGAGCGCAACGTTCTCATCTTCGATCTTGGTGGTG 3178437
Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853
|||| || ||||| || || | || | ||||| |||||||||||||| || | || |
Sbjct 3178436 GTACCTTCGATGTCTCCCTCTTGACCATCGAAGAAGGAATTTTTGAAGTCAAGTCGACCG 3178377
Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913
| ||||| || || | ||||| || ||||| || || | ||||| || || ||
Sbjct 3178376 CCGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACAGACTCGTCAATCACTTCGTCT 3178317
Query 349914 AAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGC 349972
|| || || ||| |||| || | || | | || | | || | || ||
Sbjct 3178316 CTGAGTTCAAACGT-AAGCACAAGAAGGACCTCAGCACCAACGCCCGTGCTCTTCGACGT 3178258
Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032
|| | || || ||||| || || ||||| || | || || | | || || || ||
Sbjct 3178257 CTCCGGACCGCCTGTGAGCGAGCCAAGCGCACCCTGTCTTCGTCCGCGCAGACTTCCATC 3178198
Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092
||||| || ||||| ||| || | || |||| | || || || || || || ||
Sbjct 3178197 GAAATCGACTCTCTCTATGAGGGTATCGACTTCTACACCTCCATCACCCGCGCCCGATTC 3178138
Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152
|| || | || |||||| || || | || ||||| ||||| || || |
Sbjct 3178137 GAGGAGCTGTGCCAGGATCTCTTCCGATCTACCATGGAGCCTGTCGAGCGTGTCCTCCGC 3178078
Query 350153 GATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210
||||| || | || | || || | || | || | || || || || || || || |
Sbjct 3178077 GATGCCAAGA--TCGACAAGTCCTCGGTTCACGAGATCGTCTTGGTCGGAGGATCCACCC 3178020
Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270
|||| || | | | || || | | || || || || || ||||| || || | |
Sbjct 3178019 GTATCCCCAGAATCCAGAAGCTTGTCTCCGACTTCTTCAACGGCAAGGAGCCCAACAAGT 3177960
Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322
| || || || ||||| || || || || ||||| || || ||||| ||||
Sbjct 3177959 CGATCAACCCCGATGAGGCCGTCGCCTACGGTGCCGCCGTCCAGGCTGCTAT 3177908
>seq3
Length=4818847
Score = 158 bits (174), Expect = 4e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | ||| || |||||||| || || || || || || || || |
Sbjct 1796127 TTTGCATACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGT 1796186
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | ||||| ||||| |||||||| || || || ||||| || || || || |
Sbjct 1796187 AATCAGAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGT 1796246
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||||||||| || || || || || | || ||||| || || | || || |
Sbjct 1796247 CGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACG 1796306
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || |||| ||||| |||||||| || || || || ||||||||
Sbjct 1796307 ATTCGACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 141 bits (156), Expect = 3e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || |||||||||||||| || || || || || || ||
Sbjct 1796359 CATACCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTC 1796418
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || || ||||| ||||| || |||||||| ||||| ||||||||||| |||||
Sbjct 1796419 GCTCAAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGG 1796478
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685
||||| ||||| || ||||| || || | || || || || || | ||| | ||| |
Sbjct 1796479 GGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATC-GCTGGACT 1796537
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || ||||| || | ||||| || || || || || || || ||||||||
Sbjct 1796538 CGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 120 bits (132), Expect = 9e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 140504 TTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
|||| ||||||||| | || | || |||| |||||||| ||| || || || || |
Sbjct 1795900 TTACTGACCACCACGAAGTCGCAAGACCAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGT 1795958
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | ||||| |||||||| || || || ||||||||||| | || || || |
Sbjct 1795959 AATCAGAGAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGT 1796018
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| ||||| || || || || || || || | || || || || || | ||||| |
Sbjct 1796019 CAGGGGGAATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAG 1796078
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || |||| ||||| || || || || || || || || |||||
Sbjct 1796079 ATTCCACCTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 109 bits (120), Expect = 2e-18
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || || ||||| || || || || || ||
Sbjct 1796587 CATACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1796646
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || |||||||| |||||||| || || ||||| || || ||||| |||||
Sbjct 1796647 GCTCAGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGG 1796706
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685
|||||| ||||| || |||||||| || | || || || || || | ||| | ||| |
Sbjct 1796707 AGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATC-GCTGGACT 1796765
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|||| || || || | |||||||| || | |||
Sbjct 1796766 CAACCTCGAGGGTGATGGTCTTTCCCGTGACTGT 1796799
>seq1
Length=6490813
Score = 132 bits (146), Expect = 1e-25
Identities = 244/357 (68%), Gaps = 3/357 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| ||||| | || | ||| |||| | || ||||||||| |||| || ||||| |
Sbjct 5493128 CCTGAAGAGGTCTCGGCCATGATTTTGGGCAAGATGAAGGAAGTTGCAGAGGCATACCTG 5493069
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | | ||| || | || ||| | || || ||||||||||| || || || |||||
Sbjct 5493068 GGCAAGAAAGTGACCCACGCCGTTGTGACGGTTCCAGCCTATTTCAACGACGCACAGCGA 5493009
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| |||| |||||||| || ||||| | || | || ||
Sbjct 5493008 CAGGCCACCAAGGATGCCGGCACGATTGCGGGCTTGGTCGTTCTTCGTGTGGTCAACGAG 5492949
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| || || || || || || || || ||||| || || | | | || | | |||
Sbjct 5492948 CCGACGGCCGCGGCCATCGCCTACGGTCTTGACAA---GAAGGGCAAGGAGAGCCAGATT 5492892
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| | | ||| | |||||||||||||| ||||| || || || | |||| || ||
Sbjct 5492891 ATTGTCTACGATCTCGGTGGTGGTACTTTCGATGTCTCCCTCCTCTCTATTGAGGATGGT 5492832
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|||| || || || || |||||||| || ||||||||||| || ||||| |||
Sbjct 5492831 GTTTTCGAGGTCTTGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGAT 5492775
>seq6
Length=3558010
Score = 107 bits (118), Expect = 6e-18
Identities = 221/329 (67%), Gaps = 0/329 (0%)
Strand=Plus/Plus
Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179
||||| || || || ||||| |||||||||||| || | | || || || ||
Sbjct 1825124 ATCAAGGCCGTCCTCCCCATAGATGAATTGAACAATGTTGCCGCGAGAGTCTCGGACCGT 1825183
Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239
| ||||| | || | | ||||| | || || | ||||| || || |||||
Sbjct 1825184 GCTGTCATACTTGACAGTCACCTCTTCAAGAGCCTTGACCAGTCGGCGCTGGATGTAACC 1825243
Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299
||| | || || ||||| || ||||| | ||| |||||||| |||| || |||||
Sbjct 1825244 AGTCTCGGCGGTCTTGACTGCTGTGTCAATAAGACCTTCACGACCAGCCATGGCGTGGAA 1825303
Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359
||| |||||||| ||||| || |||| || | |||| |||| | ||| |||| |
Sbjct 1825304 GAAGAATTCAGTCGGAGTTAGACCACGAAGATATGAGTTCTCCACAAAGCCTCGAGAAGG 1825363
Query 378360 TGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAAT 378419
| |||| ||||| |||| | | || || | || |||| || || || | |||||
Sbjct 1825364 AGCGGAATAATCATCCTTTGCAAAGTGCGGAAGAGTGCGATACTTGAAGCCGAACGGAAT 1825423
Query 378420 TCGTTTTCCATCAACATTCTGTTGACCAA 378448
||||| || || || ||||||||||
Sbjct 1825424 GCGTTTGCCTTCGACGGCTTGTTGACCAA 1825452
Score = 84.2 bits (92), Expect = 7e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || | || || || ||||| ||||| || || || || ||
Sbjct 445082 CCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 445141
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || || ||||| ||||| || || || ||||| || |||||||| || ||||||
Sbjct 445142 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 445201
Query 140631 ATTCCTTCTTTATC 140644
|||||||| || ||
Sbjct 445202 ATTCCTTCCTTGTC 445215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254167029636
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