Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 224 1e-53
seq1 145 8e-30
>seq5
Length=3814559
Score = 224 bits (248), Expect = 1e-53
Identities = 474/699 (68%), Gaps = 6/699 (1%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||||||| || | ||| || |||| |||||| |||||| | || || || |||||
Sbjct 1504021 GAGACGTACAACCTCATGTCTCAGAAGTGCTTTACTCACGCCTCTCCCACTCTCTTCAAT 1504080
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
||||| ||| ||| || ||| ||||| |||||| || | | |||||||| |||
Sbjct 1504081 GCTGGAACGCCTCAACCCCAGCTGTCGTCATGCTTCTTGATCGATATGAAGGACGACAGC 1504140
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| ||||||||||| || |||||| |||||| ||||||||| | || |||
Sbjct 1504141 ATCGAGGGCATCTACGACACCCTCAAGATTTGTGCCATGATCTCCAAGACTGCCGGAGGT 1504200
Query 53423 ATCGGTATCCACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
||||| | || ||| | | ||||||| | ||| | ||| || || || ||
Sbjct 1504201 ATCGGCCT-CAATGCCCATTGCATCCGTGCCACCGGTTCCTACATCTCTGGTACTAATGG 1504259
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || | || || | || ||||| ||||||||||||||||| || || || || |
Sbjct 1504260 CACCTCCAACGGTCTCATTCCCATGCTTCGCGTCTTCAACAACACTGCTCGCTATGTTGA 1504319
Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600
||||||||| ||||| | ||| | | || |||||||| || ||||| |||||||| |
Sbjct 1504320 CCAGGGTGGCAACAAGCGTCCAGGTG-CCTTTGCCATCTATCTGGAGCCATGGCACGCTG 1504378
Query 53601 ACATTATGGAGTTTCTCGAGC-TGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659
|| | | || |||| || | || | |||||| || | |||||| | || ||
Sbjct 1504379 ACGTCTTTGA-CTTCTTGAACTTGAGAAAGAATCACGGCAAAGAAGAGGTCCGAGCACGC 1504437
Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719
||| |||| || || |||| |||||| || |||||| | || |||||| || |
Sbjct 1504438 GACTTGTTCTATGCCCTCTGGACTCCGGATCTTTTCATGAAGCGTGTCGAGAAGAACCAA 1504497
Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779
|| ||| ||| | || || |||| ||| || ||| | |||||||| || ||
Sbjct 1504498 GACTGGACTCTGTTCTGTCCCCACGAAGCCCCGGGTCTCGCCGACGTCTACGGGGACGAA 1504557
Query 53780 TTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
|| | | |||| || |||| | |||||| ||| |||||||
Sbjct 1504558 TTCGAGGCCCTGTACGAGAAATACGAGAAAGAAGGCCGCGGGCGTCAGACCATCAAGGCC 1504617
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899
| || | ||| | || ||||| || ||| ||||| || || || ||||| |
Sbjct 1504618 CAGAAGCTGTGGTACGCGGTCCTCGAGGCACAGACCGAGACTGGTACCCCATACATCCTC 1504677
Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||||| | |||| ||||||||||||||||||||
Sbjct 1504678 TACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAAC 1504716
Score = 96.9 bits (106), Expect = 4e-15
Identities = 298/450 (66%), Gaps = 17/450 (4%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| || || |||||||| || || || | |||||| ||||||||
Sbjct 1505242 CGCAACTCTCTCCTCGTTGCACCCATGCCAACTGCATCCACTTCGCAGATCTTGGGCAAC 1505301
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| |||||||| ||||| | ||||||||| ||| || | || ||||||
Sbjct 1505302 AACGAATGTTTCGAGCCATACACCTCGAACATCTACTCGCGTCGTGTGTTGGCTGGTGAG 1505361
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| | ||||| ||| | ||||||||| | | ||| |
Sbjct 1505362 TTCCAAGTCGTCAACCCATGGCTCCTGAAGGACCTGGTCGACCTTGGTCTCTGGTCCGAC 1505421
Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCC 55719
| || |||| || || | || |||| || || |||||||| || | |||
Sbjct 1505422 AACATGAAGAATCGCATCATCGCCG--ACGGTGGCTCTGTCCAGAACATCCCCAACATCC 1505479
Query 55720 TCTGCG-TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG-TCTGATT 55777
|| | |||||| | ||| ||| || |||||||| || | | | | | |
Sbjct 1505480 CGGCCGATATCAAGGCCCTCTACAAGACTGTCTGGGAGATCAGCCA-ACGTGCTGTTCTC 1505538
Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATC---TTC 55834
| ||| ||| || || || || | |||||| |||||||| |||||||||||| ||
Sbjct 1505539 CAGATGGCTGCCGACCGAGGCGCTTTCATCGATCAGTCCCAATCTCTGAACATCCATCTC 1505598
Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGG-TGGAAGAAGGG 55893
| |||| || | ||| |||| | | ||||||||| ||| |||| ||||||| |||
Sbjct 1505599 AAGGAG---CCAACGATGGGCAAGATCACCTCGATGCA-TTTCGCGGGCTGGAAGATGGG 1505654
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGAC 55923
|||||||| || |||||||| || || ||
Sbjct 1505655 TCTCAAGACTGGCATGTACTACCTCCGTAC 1505684
>seq1
Length=6490813
Score = 145 bits (160), Expect = 8e-30
Identities = 318/471 (68%), Gaps = 8/471 (2%)
Strand=Plus/Plus
Query 117134 GGAACGTAGCAGCTGAACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGC 117193
|||| | || |||| | ||||| || ||||| || |||||||| | || | ||||||
Sbjct 2518608 GGAATGGAGGAGCTCCAACCAGTACCAATACCATCGGCACCATTGACGAGGACCATCGGG 2518667
Query 117194 ACGACAGGAACGTAGAACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGC 117253
|| || ||||| |||| ||| || || | || | |||| || ||| || | ||
Sbjct 2518668 ACAACGGGAACATAGACCTCTGGTTCGATCTTCTTGTCGTCATCAGTGTTATATGTCAGA 2518727
Query 117254 ACCGCATTGTCACTCGGATCGAATATGTTCTTGGTCCAC--GGTGCTAGGCGAGTGAAAA 117311
| | | |||| || | ||| | ||| || || || || | ||| || |||||||
Sbjct 2518728 AGTGGCTCGTCAGCGGGGTGGAAGA-GTT-TTCGTGCAAATGGCGATAGACGGGTGAAAA 2518785
Query 117312 TGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCG 117371
||||||||| ||| |||| ||| |||| || | |||||||| ||||| ||| ||
Sbjct 2518786 TGTAACGAGCGCTGGCAGAATCGCTGCCTCCCTGATTTCGCGTACCAAATTGGCCAGACG 2518845
Query 117372 GCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTAC 117431
| || || | || | |||||| | ||||||||| | || |||| | ||||| ||
Sbjct 2518846 GTTCTAACAAATTGATGTTGTTCGATCCCACAAAGGTCTGGGCCAGGCCAACAATGGTTT 2518905
Query 117432 CTTGGAGGCTCGCCTCACCATGGTGATACGCCGTC--TGCTCCGCCACGTAGCCCGCCAG 117489
|||||| | ||| || ||||| || |||||| | ||||| || | || || ||
Sbjct 2518906 GCTGGAGGGATGTCTCTCCGTGGTGGTAGGCCGTCATTCCTCCG--ACCAAACCAGCGAG 2518963
Query 117490 CTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCG 117549
| || || ||||| || | ||| ||| |||| ||||||| | || || || ||
Sbjct 2518964 TTCGGCGACTTTCATATCCTTCTTCAAGTTTCGTTTGAAGCAGGCAAACATGACTTTCCG 2519023
Query 117550 CTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600
||| | || |||| ||||| | ||| |||||||| || || ||||
Sbjct 2519024 CTGGCCCGGTTTCAAGCCATCGACGACGGAGGGGATCGATCGAATGTTGTC 2519074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215917917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |