Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 212 7e-50 seq3 183 3e-41 seq1 116 4e-21 seq6 109 6e-19 >seq5 Length=3814559 Score = 212 bits (234), Expect = 7e-50 Identities = 1116/1757 (64%), Gaps = 75/1757 (4%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| |||||||| ||| |||||||||| | ||||| || Sbjct 1505684 GTACGGAGGTAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCCGCGAAATGCATCGAG 1505625 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGA---AGATGTTCAGAGACTGAGACTGACAG 80154 ||| ||| | | || || |||| ||| |||||||||||| || |||||| | Sbjct 1505624 GTGATCTTGCCCATCGTTGG---CTCCTTGAGATGGATGTTCAGAGATTGGGACTGATCG 1505568 Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTG-ACTTTTGTGGAATTTCCCATAC 80213 |||||||| || || || || ||||| | | || | || || | | || ||||| || Sbjct 1505567 ATGAAAGCGCCTCGGTCGGCAGCCATCTGGAGAACAGCACGTTGGCTG-ATCTCCCAGAC 1505509 Query 80214 TGTACGATACA---CCTTACGAAGCTCCTCTGGAATGT---CCAGATTTTGCACACTGCC 80267 || || | |||| | || | || |||| | || || ||| ||| Sbjct 1505508 AGTCTTGTAGAGGGCCTT---GATATCGGCCGGGATGTTGGGGATGTTCTGGACAGAGCC 1505452 Query 80268 ACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATC 80327 |||||| | || |||| |||| | | ||||| |||||| | | ||| || Sbjct 1505451 ACCGTCGGCGATGATGCGATTCTTCATGTTGTCGGACCAGAGACCAAGGTCGACCAGGTC 1505392 Query 80328 TTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAG 80387 |||| || ||| | | ||||| || || | |||||| || | Sbjct 1505391 CTTCAGGAGCCATGGGTTGACGACTTGGAACTCACCAGCCAACACACGACGCGAGTAGAT 1505332 Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||| | ||||| ||||| || |||||||| || | |||||| | ||| || || Sbjct 1505331 GTTCGAGGTGTATGGCTCGAAACATTCGTTGTTGCCCAAGATCTGCGAAGTGGATGCAGT 1505272 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAA 80507 ||||| || | || | || || || || | ||||| ||| | |||| || Sbjct 1505271 TGGCATGGGTGCAACGAGGAGAGAGTTGCGAACACCGTG---TTTGGCAATCTCG-GC-- 1505218 Query 80508 ATCTGACCAAAAATCAACCCCA------AC--GCTGTGAC--CCCACATGTCGTGCTGCA 80557 | | | || ||| |||| || | ||||| ||||||||||| ||| | Sbjct 1505217 -CTTCAACGAATCCCAATCCCACAGGTCACTGGGAGTGACATTCCACATGTCGTACTGAA 1505159 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 || |||| ||| | || || || | ||||| || || |||||| ||| || | Sbjct 1505158 GAATACCCTGCGAGACTGGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTCCTTTGCAA 1505099 Query 80618 GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677 | || ||||| | ||||||| |||||||| ||| ||| |||| ||| | Sbjct 1505098 GTTCGCACGATGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGACGTTAAGTT 1505039 Query 80678 CGCGCGCCTGTGGGTCGTCGAACG--ACAAGCCCATCATCATGAACACGTCAGCCAGGCC 80735 || || | || ||||| | | | || | || | ||| | || || || || Sbjct 1505038 GTCGGGCTTCCGGTGAATCGAAAGGAAGACGCAGAGCA--AGGAAGGCATCTGCAAGACC 1504981 Query 80736 CTGAACGCCGATGGCGATCGGG-CGGTGGCGCTTGTTCGATCGCTC-GGCCTCCGGAATT 80793 || || || | | | | |||| ||||| || || | || || |||||| || | Sbjct 1504980 TTGGACACCCA-GACCAACGGGTCGGTGACGGAAATT-GCTCTTTCTGGCCTCAGGCACG 1504923 Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 || ||| |||| ||||||| ||||| |||||| || |||||| | || || || Sbjct 1504922 GGATAATAGTTGACGTCGATGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACTTCG 1504863 Query 80854 TGAAGTTTCTGAAAGTCGAATTGGTTCC---CC---TTCACAAATGCCGGAAGGCTCAGG 80907 ||||| ||||| ||| | | || | ||| || | |||||| ||| Sbjct 1504862 TGAAGACGGCCGAAGTCATATTCGCCACGAGCCTGGTCCACGAAGGTGGGAAGGGCAAGG 1504803 Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || || || ||||| ||||| ||||| || | | || || ||||||||||| |||||| Sbjct 1504802 GAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGCAC 1504743 Query 80968 AAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025 | || || ||| || ||||||| ||| |||||||| ||| ||||||||| | Sbjct 1504742 AGGTTGGA--GCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1504685 Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085 |||||||| ||||| |||||||| |||||| ||||| || ||||| |||| ||| | Sbjct 1504684 CCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCACA 1504625 Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTT 81145 || | ||||||| || || |||||| | | || || |||| Sbjct 1504624 GCTTCTGGGCCTTGATGGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCTCGTACAGGG 1504565 Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 | ||||| | | | |||| | || | ||| | ||| |||| || || | ||| Sbjct 1504564 CCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGACAGAACAGAG 1504505 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 |||||| || ||||| ||| |||||||||| || || |||||||||| || Sbjct 1504504 TCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGA 1504445 Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325 ||| |||||| || |||| || | || || || | ||| | | ||||| | Sbjct 1504444 ACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAGTCAA 1504385 Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GC 81379 || ||| || ||||||||||||||||| | ||| | | | ||| |||| || Sbjct 1504384 AGACGTCAGCGTGCCATGGCTCCAGATAGATGGC-AAAGGCACCT--GGACGCTTGTTGC 1504328 Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439 ||||||||| || || || ||||| ||| || || || | ||| || |||| ||| | Sbjct 1504327 CACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGT 1504268 Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGA 81497 || || || ||||| ||| || || |||| || | | || |||| Sbjct 1504267 TGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTG- 1504209 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||||| || || | ||| || ||| ||||| || | ||| || || || Sbjct 1504208 -AGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGAT 1504150 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 ||||||||||| || | ||||| || | |||||| || |||| ||| || | Sbjct 1504149 GCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGG-----T 1504095 Query 81618 TGAG-----CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATC 81672 |||| || |||||||| || || || | |||||| | || | | ||||| Sbjct 1504094 TGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATG 1504035 Query 81673 AGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGC 81732 |||| || || || || | || |||||| ||||||||||| | | |||||| Sbjct 1504034 AGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGC 1503975 Query 81733 ATAAACATGTACTGGGG 81749 || | ||||| ||| || Sbjct 1503974 ATGAGCATGTGCTGAGG 1503958 >seq3 Length=4818847 Score = 183 bits (202), Expect = 3e-41 Identities = 179/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| |||||||| || ||||||||||| ||||| | Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || || ||||||||||| || ||||| || |||||| Sbjct 1796529 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 1796470 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || || ||||| ||||| || ||||||| || ||| | ||| ||||| || Sbjct 1796469 CAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGC-GACTACAA 1796411 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||||||||| ||| | || || || ||||| Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGTCCTCCGCCTCCGTGGTGG 1796363 Score = 149 bits (164), Expect = 7e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| || ||||| || || | Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || ||||||||||| ||||| || ||||| Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || |||||||| ||||| || || |||| || || || | || || || Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||||||| | |||||||| ||||| ||||| || Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCGACTTCGTGGTGGTCA 1795904 Score = 145 bits (160), Expect = 9e-30 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| || || || ||||||||||| | |||| ||| | || | ||| | Sbjct 1796793 ACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGTCG 1796734 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| || |||||||| ||||||||||| || || || || ||||| Sbjct 1796733 AAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGTAAA 1796674 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||||||| |||| || ||||| ||| ||||| || |||| ||||| ||||| || || Sbjct 1796673 CAACTCGAAGATGGCCGCACCCTGAGC-GACTACAACATCCAGAAGGAGTCCACCCTGCA 1796615 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| || ||||| Sbjct 1796614 CTTGGTCCTCCGTCTCCGTGGTGG 1796591 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| ||||| || || || || || Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || || |||||||| |||||||| || ||||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || |||||||| ||||||| | || || | || || || Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || ||||| || | | || || ||||| Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135 >seq1 Length=6490813 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||| ||||| || | || Sbjct 4921537 CTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGAT 4921596 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || ||||||||||| || || ||||| ||||||||||| || Sbjct 4921597 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || |||||||| ||||||| |||||||| ||| ||||| || |||| | Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGC-GACTACAACATCCAGA 4921715 Query 27593 AGG 27595 ||| Sbjct 4921716 AGG 4921718 Score = 109 bits (120), Expect = 6e-19 Identities = 267/403 (66%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCG 32061 ||||| || || || | |||||| |||| ||| || || || ||||| || || Sbjct 2519026 CAGCGGAAAGTCATGTTTGCCTGCTTCAAACGAAACTTGAAGAAGGATATGAAAGTCGCC 2518967 Query 32062 CAGCTGTCGGGCTACGTGGCAGAGCAA--ACGGCCTATCACCACGGCGAGGCGTCGCTCC 32119 | || | || | || | ||| || |||||||| |||||||| ||| | || |||| Sbjct 2518966 GAACTCGCTGGTTTGGTCG--GAGGAATGACGGCCTACCACCACGGAGAGACATCCCTCC 2518909 Query 32120 AGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCG 32179 || |||||||| ||| || |||| |||||| || | || ||| | || || | | Sbjct 2518908 AGCAAACCATTGTTGGCCTGGCCCAGACCTTTGTGGGATCGAACAACATCAATTTGTTAG 2518849 Query 32180 AGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTT 32239 | || ||||| || ||||| || || || |||| ||| |||| ||| | |||| Sbjct 2518848 AACCGTCTGGCCAATTTGGTACGCGAAATCAGGGAGGCAGCGATTCTGCCAGCGCTCGTT 2518789 Query 32240 ACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGG 32299 |||| ||||||||||| | || | | || || | ||| |||| | ||||| | Sbjct 2518788 ACATTTTCACCCGTCTATCGCCATTTGCACGAAAACTCTTCCACCCCGCTGACGAGCCAC 2518729 Query 32300 TGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGC 32359 | || | || || |||||||| || | |||| || | | |||| ||| || Sbjct 2518728 TTCTGACATATAACACTGATGACGACAAGAAGATCGAACCAGAGGTCTATGTTCCCGTTG 2518669 Query 32360 TTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | |||||| || | || || ||||| || || || || || || Sbjct 2518668 TCCCGATGGTCCTCGTCAATGGTGCCGATGGTATTGGTACTGG 2518626 >seq6 Length=3558010 Score = 109 bits (120), Expect = 6e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| ||||||||||| |||||||| || || || || || || ||||||||||| Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||||||||| || || || || | ||| || Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096 Query 27619 CGTCTTCGCGGTGGA 27633 || ||||| |||||| Sbjct 445095 CGCCTTCGTGGTGGA 445081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310314453440