Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq5 212 7e-50
seq3 183 3e-41
seq1 116 4e-21
seq6 109 6e-19
>seq5
Length=3814559
Score = 212 bits (234), Expect = 7e-50
Identities = 1116/1757 (64%), Gaps = 75/1757 (4%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| || || ||||||||||| |||||||| ||| |||||||||| | ||||| ||
Sbjct 1505684 GTACGGAGGTAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCCGCGAAATGCATCGAG 1505625
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGA---AGATGTTCAGAGACTGAGACTGACAG 80154
||| ||| | | || || |||| ||| |||||||||||| || |||||| |
Sbjct 1505624 GTGATCTTGCCCATCGTTGG---CTCCTTGAGATGGATGTTCAGAGATTGGGACTGATCG 1505568
Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTG-ACTTTTGTGGAATTTCCCATAC 80213
|||||||| || || || || ||||| | | || | || || | | || ||||| ||
Sbjct 1505567 ATGAAAGCGCCTCGGTCGGCAGCCATCTGGAGAACAGCACGTTGGCTG-ATCTCCCAGAC 1505509
Query 80214 TGTACGATACA---CCTTACGAAGCTCCTCTGGAATGT---CCAGATTTTGCACACTGCC 80267
|| || | |||| | || | || |||| | || || ||| |||
Sbjct 1505508 AGTCTTGTAGAGGGCCTT---GATATCGGCCGGGATGTTGGGGATGTTCTGGACAGAGCC 1505452
Query 80268 ACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATC 80327
|||||| | || |||| |||| | | ||||| |||||| | | ||| ||
Sbjct 1505451 ACCGTCGGCGATGATGCGATTCTTCATGTTGTCGGACCAGAGACCAAGGTCGACCAGGTC 1505392
Query 80328 TTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAG 80387
|||| || ||| | | ||||| || || | |||||| || |
Sbjct 1505391 CTTCAGGAGCCATGGGTTGACGACTTGGAACTCACCAGCCAACACACGACGCGAGTAGAT 1505332
Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447
||| | ||||| ||||| || |||||||| || | |||||| | ||| || ||
Sbjct 1505331 GTTCGAGGTGTATGGCTCGAAACATTCGTTGTTGCCCAAGATCTGCGAAGTGGATGCAGT 1505272
Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAA 80507
||||| || | || | || || || || | ||||| ||| | |||| ||
Sbjct 1505271 TGGCATGGGTGCAACGAGGAGAGAGTTGCGAACACCGTG---TTTGGCAATCTCG-GC-- 1505218
Query 80508 ATCTGACCAAAAATCAACCCCA------AC--GCTGTGAC--CCCACATGTCGTGCTGCA 80557
| | | || ||| |||| || | ||||| ||||||||||| ||| |
Sbjct 1505217 -CTTCAACGAATCCCAATCCCACAGGTCACTGGGAGTGACATTCCACATGTCGTACTGAA 1505159
Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617
|| |||| ||| | || || || | ||||| || || |||||| ||| || |
Sbjct 1505158 GAATACCCTGCGAGACTGGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTCCTTTGCAA 1505099
Query 80618 GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677
| || ||||| | ||||||| |||||||| ||| ||| |||| ||| |
Sbjct 1505098 GTTCGCACGATGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGACGTTAAGTT 1505039
Query 80678 CGCGCGCCTGTGGGTCGTCGAACG--ACAAGCCCATCATCATGAACACGTCAGCCAGGCC 80735
|| || | || ||||| | | | || | || | ||| | || || || ||
Sbjct 1505038 GTCGGGCTTCCGGTGAATCGAAAGGAAGACGCAGAGCA--AGGAAGGCATCTGCAAGACC 1504981
Query 80736 CTGAACGCCGATGGCGATCGGG-CGGTGGCGCTTGTTCGATCGCTC-GGCCTCCGGAATT 80793
|| || || | | | | |||| ||||| || || | || || |||||| || |
Sbjct 1504980 TTGGACACCCA-GACCAACGGGTCGGTGACGGAAATT-GCTCTTTCTGGCCTCAGGCACG 1504923
Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853
|| ||| |||| ||||||| ||||| |||||| || |||||| | || || ||
Sbjct 1504922 GGATAATAGTTGACGTCGATGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACTTCG 1504863
Query 80854 TGAAGTTTCTGAAAGTCGAATTGGTTCC---CC---TTCACAAATGCCGGAAGGCTCAGG 80907
||||| ||||| ||| | | || | ||| || | |||||| |||
Sbjct 1504862 TGAAGACGGCCGAAGTCATATTCGCCACGAGCCTGGTCCACGAAGGTGGGAAGGGCAAGG 1504803
Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967
|| || || ||||| ||||| ||||| || | | || || ||||||||||| ||||||
Sbjct 1504802 GAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGTGCAC 1504743
Query 80968 AAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025
| || || ||| || ||||||| ||| |||||||| ||| ||||||||| |
Sbjct 1504742 AGGTTGGA--GCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1504685
Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085
|||||||| ||||| |||||||| |||||| ||||| || ||||| |||| ||| |
Sbjct 1504684 CCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCACA 1504625
Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTT 81145
|| | ||||||| || || |||||| | | || || ||||
Sbjct 1504624 GCTTCTGGGCCTTGATGGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCTCGTACAGGG 1504565
Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205
| ||||| | | | |||| | || | ||| | ||| |||| || || | |||
Sbjct 1504564 CCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGACAGAACAGAG 1504505
Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265
|||||| || ||||| ||| |||||||||| || || |||||||||| ||
Sbjct 1504504 TCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGA 1504445
Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325
||| |||||| || |||| || | || || || | ||| | | ||||| |
Sbjct 1504444 ACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAGTCAA 1504385
Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GC 81379
|| ||| || ||||||||||||||||| | ||| | | | ||| |||| ||
Sbjct 1504384 AGACGTCAGCGTGCCATGGCTCCAGATAGATGGC-AAAGGCACCT--GGACGCTTGTTGC 1504328
Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439
||||||||| || || || ||||| ||| || || || | ||| || |||| ||| |
Sbjct 1504327 CACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGT 1504268
Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGA 81497
|| || || ||||| ||| || || |||| || | | || ||||
Sbjct 1504267 TGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTG- 1504209
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| ||||| || || | ||| || ||| ||||| || | ||| || || ||
Sbjct 1504208 -AGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGAT 1504150
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
||||||||||| || | ||||| || | |||||| || |||| ||| || |
Sbjct 1504149 GCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGG-----T 1504095
Query 81618 TGAG-----CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATC 81672
|||| || |||||||| || || || | |||||| | || | | |||||
Sbjct 1504094 TGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATG 1504035
Query 81673 AGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGC 81732
|||| || || || || | || |||||| ||||||||||| | | ||||||
Sbjct 1504034 AGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGC 1503975
Query 81733 ATAAACATGTACTGGGG 81749
|| | ||||| ||| ||
Sbjct 1503974 ATGAGCATGTGCTGAGG 1503958
>seq3
Length=4818847
Score = 183 bits (202), Expect = 3e-41
Identities = 179/228 (79%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| ||||| |||||||| || ||||||||||| ||||| |
Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || || ||||||||||| || ||||| || ||||||
Sbjct 1796529 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 1796470
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| || || ||||| ||||| || ||||||| || ||| | ||| ||||| ||
Sbjct 1796469 CAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGC-GACTACAA 1796411
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| ||||||||||| ||| | || || || |||||
Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGTCCTCCGCCTCCGTGGTGG 1796363
Score = 149 bits (164), Expect = 7e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || |||||||| ||||| || ||||| || || |
Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||||||||| ||||| || |||||
Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || |||||||| ||||| || || |||| || || || | || || ||
Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||||||||| | |||||||| ||||| ||||| ||
Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCGACTTCGTGGTGGTCA 1795904
Score = 145 bits (160), Expect = 9e-30
Identities = 156/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || || ||||||||||| | |||| ||| | || | ||| |
Sbjct 1796793 ACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGTCG 1796734
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||||||||| || |||||||| ||||||||||| || || || || |||||
Sbjct 1796733 AAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGTAAA 1796674
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|||||||| |||| || ||||| ||| ||||| || |||| ||||| ||||| || ||
Sbjct 1796673 CAACTCGAAGATGGCCGCACCCTGAGC-GACTACAACATCCAGAAGGAGTCCACCCTGCA 1796615
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||| | ||||| || |||||
Sbjct 1796614 CTTGGTCCTCCGTCTCCGTGGTGG 1796591
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| ||||| || || || || ||
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || || |||||||| |||||||| || |||||
Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || |||||||| ||||||| | || || | || || ||
Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || ||||| || | | || || |||||
Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135
>seq1
Length=6490813
Score = 116 bits (128), Expect = 4e-21
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || || |||||||| || || || ||||| ||||| || | ||
Sbjct 4921537 CTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGAT 4921596
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||| | || || ||||||||||| || || ||||| ||||||||||| ||
Sbjct 4921597 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || || || |||||||| ||||||| |||||||| ||| ||||| || |||| |
Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGC-GACTACAACATCCAGA 4921715
Query 27593 AGG 27595
|||
Sbjct 4921716 AGG 4921718
Score = 109 bits (120), Expect = 6e-19
Identities = 267/403 (66%), Gaps = 4/403 (1%)
Strand=Plus/Minus
Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCG 32061
||||| || || || | |||||| |||| ||| || || || ||||| || ||
Sbjct 2519026 CAGCGGAAAGTCATGTTTGCCTGCTTCAAACGAAACTTGAAGAAGGATATGAAAGTCGCC 2518967
Query 32062 CAGCTGTCGGGCTACGTGGCAGAGCAA--ACGGCCTATCACCACGGCGAGGCGTCGCTCC 32119
| || | || | || | ||| || |||||||| |||||||| ||| | || ||||
Sbjct 2518966 GAACTCGCTGGTTTGGTCG--GAGGAATGACGGCCTACCACCACGGAGAGACATCCCTCC 2518909
Query 32120 AGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCG 32179
|| |||||||| ||| || |||| |||||| || | || ||| | || || | |
Sbjct 2518908 AGCAAACCATTGTTGGCCTGGCCCAGACCTTTGTGGGATCGAACAACATCAATTTGTTAG 2518849
Query 32180 AGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTT 32239
| || ||||| || ||||| || || || |||| ||| |||| ||| | ||||
Sbjct 2518848 AACCGTCTGGCCAATTTGGTACGCGAAATCAGGGAGGCAGCGATTCTGCCAGCGCTCGTT 2518789
Query 32240 ACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGG 32299
|||| ||||||||||| | || | | || || | ||| |||| | ||||| |
Sbjct 2518788 ACATTTTCACCCGTCTATCGCCATTTGCACGAAAACTCTTCCACCCCGCTGACGAGCCAC 2518729
Query 32300 TGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGC 32359
| || | || || |||||||| || | |||| || | | |||| ||| ||
Sbjct 2518728 TTCTGACATATAACACTGATGACGACAAGAAGATCGAACCAGAGGTCTATGTTCCCGTTG 2518669
Query 32360 TTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
| |||||| || | || || ||||| || || || || || ||
Sbjct 2518668 TCCCGATGGTCCTCGTCAATGGTGCCGATGGTATTGGTACTGG 2518626
>seq6
Length=3558010
Score = 109 bits (120), Expect = 6e-19
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| ||||||||||| |||||||| || || || || || || |||||||||||
Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || ||||| | ||||| || |||||||||| || || || || | ||| ||
Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096
Query 27619 CGTCTTCGCGGTGGA 27633
|| ||||| ||||||
Sbjct 445095 CGCCTTCGTGGTGGA 445081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310314453440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |