Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 2e-22
seq6 87.8 1e-12
>seq3
Length=4818847
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| ||||| ||||| || |||||||||||||| || ||||| ||||| ||
Sbjct 1795907 CCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1795966
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| || || || || ||||| || || ||||||||||| || ||
Sbjct 1795967 AGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 1796026
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| || | || ||| | || ||||| |||||
Sbjct 1796027 ATGCCCTCCTTGTCTTGGATC-TTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| ||||| || || || | || || || || || |||||
Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 102 bits (112), Expect = 5e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||| | |||||| || ||||| || ||||| ||||| || ||||||| | || ||
Sbjct 1796152 CACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTGCCATCCTC 1796211
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|||||| || ||||| || || | ||||||||||| || || | ||| |||||||||
Sbjct 1796212 AAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTG 1796271
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTT 34674
|||| || | || || | || |||||| || | || ||||||| ||| || ||
Sbjct 1796272 GATC-TTGGACTTGACATTGTCGATGGTGTCTGACGAT-TCGACTTCCAGGGTAATGGTC 1796329
Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||||| || || || || ||||||||
Sbjct 1796330 TTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
>seq6
Length=3558010
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| |||| ||||| || || || ||||||||| ||||| || || ||
Sbjct 445082 CCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 445141
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| ||||| || ||||| || || | || || ||||| || ||
Sbjct 445142 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 445201
Query 34600 ACTCCCTCCTTGTCTGTG 34617
| ||| ||||||||||||
Sbjct 445202 ATTCCTTCCTTGTCTGTG 445219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729553970796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |