Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 122 8e-23 seq6 95.1 1e-14 >seq3 Length=4818847 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | ||||| || ||||| ||| |||| Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| ||||| || || ||||| ||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| ||| | || || | || | || ||||||||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| ||||| | ||| | || | | |||| ||||| || Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGGTAT 1796132 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || |||||| | ||||| || || |||||| | || Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| || ||||| || || || ||| Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || ||||| || ||||||| | || | || ||||||||| Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||| || | || ||||| ||||| | || ||||| Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCGACTTCGTGGTGG 1795907 >seq6 Length=3558010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| ||||| || || ||||| || || || | || | ||||||||| ||| | || Sbjct 445216 AGACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGA 445157 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||| | ||| | ||||| |||||||| ||||||||||||||| | || ||||| | Sbjct 445156 AGACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCT 445097 Query 27200 GCGTTTGCGGGGTGG 27214 ||| | || ||||| Sbjct 445096 GCGCCTTCGTGGTGG 445082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918334762240