Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 8e-23
seq6 95.1 1e-14
>seq3
Length=4818847
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | ||||| || ||||| ||| ||||
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| ||||| || || ||||| |||
Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||||||| ||| | || || | || | || |||||||||
Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| ||||| | ||| | || | | |||| ||||| ||
Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGGTAT 1796132
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| || |||||| | ||||| || || |||||| | ||
Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| || ||||| || || || |||
Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | || ||||| || ||||||| | || | || |||||||||
Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||| || | || ||||| ||||| | || |||||
Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCGACTTCGTGGTGG 1795907
>seq6
Length=3558010
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| ||||| || || ||||| || || || | || | ||||||||| ||| | ||
Sbjct 445216 AGACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGA 445157
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
|||| | ||| | ||||| |||||||| ||||||||||||||| | || ||||| |
Sbjct 445156 AGACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCT 445097
Query 27200 GCGTTTGCGGGGTGG 27214
||| | || |||||
Sbjct 445096 GCGCCTTCGTGGTGG 445082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918334762240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |