Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 2e-27
>seq5
Length=3814559
Score = 138 bits (152), Expect = 2e-27
Identities = 407/617 (66%), Gaps = 24/617 (4%)
Strand=Plus/Minus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| || ||||| || ||||| || |||| || ||| || | || || | ||
Sbjct 1504484 ACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCATAGAACAAGTCGCGTGCTCGGACC 1504425
Query 78063 TCTTCATTTCCTGTATTCTTTTT-AAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121
||||| || || ||||||| | ||| || |||| || | | |||| ||||||||
Sbjct 1504424 TCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAG-TCAAAGACGTCAGCGTGCCATGG 1504366
Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181
|| ||||| || || | | || || || || || || ||||| || | ||| | ||
Sbjct 1504365 CTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAGC 1504306
Query 78182 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGA 78241
||||| || | || | | ||| ||||| | |||||| || || ||||| || |||||
Sbjct 1504305 AGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAGA 1504246
Query 78242 AATATAACTTCCACTTGCGCGAATATTACTAATGGATATC----CCTATTCCTCCTGCCA 78297
|| || || | || || || ||||| || || || ||||| ||
Sbjct 1504245 GATGTAGGAACCGGTGGCACGGATGC----AATGGGCATTGAGGCCGATACCTCCGGCAG 1504190
Query 78298 TCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCA 78357
|||| || || | || ||| || | || |||||||| ||||| || ||||| |||
Sbjct 1504189 TCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCT 1504130
Query 78358 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATG 78417
|||| | | | || || |||| || | ||| ||||| ||||| || | |
Sbjct 1504129 TCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAG 1504070
Query 78418 TCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATT 78477
| ||||| || || ||||| || || | ||| | || ||||| || || || || ||
Sbjct 1504069 TGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCC--TT 1504012
Query 78478 CT----AT-GTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCT 78532
|| || ||||| ||| || || |||| |||||||| | ||| ||||||||||
Sbjct 1504011 CTCAACATCGTCCCCGTGA---ATACCAACCGACACACGCATGAGCATGTGCTGAGGTCG 1503955
Query 78533 TTCAACCGTCTTA-TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591
|||| | | ||| || || |||| || ||||||| | |||| || || |||||||
Sbjct 1503954 TTCAGC-GACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAA 1503896
Query 78592 AATAGTTGTA--TGAAA 78606
|||| | ||| |||||
Sbjct 1503895 AATATTGGTAGTTGAAA 1503879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668695799680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |