Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-29 seq1 91.5 3e-13 >seq3 Length=4818847 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| |||||||| || || || || || |||||||||||||| | | ||||| Sbjct 1796144 AGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTG 1796203 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || ||||||||||| || | ||| ||||| | | ||||||||| Sbjct 1796204 CCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCC 1796263 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| | || | | ||||||| || ||||| || ||| Sbjct 1796264 TTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTA 1796323 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| |||||| Sbjct 1796324 ATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 125 bits (138), Expect = 2e-23 Identities = 164/223 (74%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| |||||||||||||| || || ||||||||||| ||| || || | Sbjct 1796371 GAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCG 1796430 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| || ||||||||||| | |||||||| | | || ||| Sbjct 1796431 GCCATCCTCAAGCTGCTTT--CCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCT 1796488 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAA 152061 ||||| || || || || ||||| | || | | | | ||| | ||| || |||| Sbjct 1796489 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGA--CTCGACCTCAA 1796546 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || |||||||| || ||||| ||||||| |||||| Sbjct 1796547 GAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||| || |||||||||||||| | | ||||| |||||||| | Sbjct 1795927 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATCTTCCA 1795985 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||| ||||| | | || || ||||| ||||| | Sbjct 1795986 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTGGA 1796045 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| ||| || || || || ||||| || |||| Sbjct 1796046 TCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGTCTTGC 1796105 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| ||||||| ||||| Sbjct 1796106 CAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| || ||||||||||| ||| | || | Sbjct 1796599 GAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 1796658 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| || ||||||||||| | ||||||||| | | || ||||| Sbjct 1796659 GCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTC 1796718 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGA 152063 ||| || ||||| || ||||| | || | | | | ||| | ||| || || || Sbjct 1796719 CTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGA--CTCAACCTCGAGG 1796776 Query 152064 GTAATAGTTTTGCCCGTGA 152082 || || || || ||||||| Sbjct 1796777 GTGATGGTCTTTCCCGTGA 1796795 >seq1 Length=6490813 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| ||| | || | ||||| || || || ||||||||||| Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 4921657 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||| | | ||| |||||||| || || || || ||||| | || Sbjct 4921656 AGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 4921597 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| || ||| || || || || || || ||||||||||| |||||||||||| Sbjct 4921596 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 4921537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820622600052