Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 2e-29
seq1 91.5 3e-13
>seq3
Length=4818847
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| |||||||| || || || || || |||||||||||||| | | |||||
Sbjct 1796144 AGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTG 1796203
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || || || ||||||||||| || | ||| ||||| | | |||||||||
Sbjct 1796204 CCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCC 1796263
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||| || || |||||| | || | | ||||||| || ||||| || |||
Sbjct 1796264 TTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTA 1796323
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || ||||| ||||||| ||||||
Sbjct 1796324 ATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 125 bits (138), Expect = 2e-23
Identities = 164/223 (74%), Gaps = 8/223 (4%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| |||||||||||||| || || ||||||||||| ||| || || |
Sbjct 1796371 GAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCG 1796430
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| || ||||||||||| | |||||||| | | || |||
Sbjct 1796431 GCCATCCTCAAGCTGCTTT--CCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCT 1796488
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAA 152061
||||| || || || || ||||| | || | | | | ||| | ||| || ||||
Sbjct 1796489 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGA--CTCGACCTCAA 1796546
Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || |||||||| || ||||| ||||||| ||||||
Sbjct 1796547 GAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||| || |||||||||||||| | | ||||| |||||||| |
Sbjct 1795927 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATCTTCCA 1795985
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| | | ||| ||||| | | || || ||||| ||||| |
Sbjct 1795986 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTGGA 1796045
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| ||| || || || || ||||| || ||||
Sbjct 1796046 TCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGTCTTGC 1796105
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||||||||| ||||||| |||||
Sbjct 1796106 CAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| || ||||||||||| ||| | || |
Sbjct 1796599 GAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 1796658
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || ||| || ||||||||||| | ||||||||| | | || |||||
Sbjct 1796659 GCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTC 1796718
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGA 152063
||| || ||||| || ||||| | || | | | | ||| | ||| || || ||
Sbjct 1796719 CTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGA--CTCAACCTCGAGG 1796776
Query 152064 GTAATAGTTTTGCCCGTGA 152082
|| || || || |||||||
Sbjct 1796777 GTGATGGTCTTTCCCGTGA 1796795
>seq1
Length=6490813
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| ||| | || | ||||| || || || |||||||||||
Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 4921657
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||| | | ||| |||||||| || || || || ||||| | ||
Sbjct 4921656 AGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 4921597
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || ||| || || || || || || ||||||||||| ||||||||||||
Sbjct 4921596 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 4921537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820622600052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |