Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 187 5e-42 seq1 134 3e-26 seq6 100 6e-16 >seq3 Length=4818847 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | ||||| || || ||||||||||| |||| Sbjct 1795906 ACCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1795965 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || || || || || ||||||||||| || ||||||||| || Sbjct 1795966 GAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGG 1796025 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| | || ||| | ||||||||||| |||| ||| || Sbjct 1796026 AATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | |||||| ||||| || ||||| Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| | || || ||||| | || ||| || ||||||||||| |||| Sbjct 1796134 ACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGA 1796193 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||||||| ||||| || ||||| ||||||| || |||||||| || Sbjct 1796194 GAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 1796253 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| | || || | ||||| ||||| || | |||||| Sbjct 1796254 AATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGAC 1796313 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || || | ||||| ||||| |||||||| Sbjct 1796314 TTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 163 bits (180), Expect = 6e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 ||||||||| ||||| || || ||||| | || ||| || |||||||||||||| Sbjct 1796362 ACCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCT 1796421 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||||||||| || || || || || ||||| | |||||| |||||| | Sbjct 1796422 CAAG-GTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGG 1796480 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| |||||||| | || ||| | ||||| || || | |||| Sbjct 1796481 GAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGA 1796540 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 1796541 CCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 120 bits (132), Expect = 6e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || |||||||||||||| Sbjct 1796590 ACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 1796649 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || |||||||| || || ||||| | || || |||||| || Sbjct 1796650 CAGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGG 1796709 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | ||||| || || | || || Sbjct 1796710 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAAC 1796769 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| ||||| Sbjct 1796770 CTCGAGGGTGATGGTCTTTCCCGT 1796793 >seq1 Length=6490813 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || || ||||||||||| ||||| || ||||| |||||| Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 4921657 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || || |||||||| |||||||| | || ||| | ||| Sbjct 4921656 AGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 4921597 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 || ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 4921596 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 4921537 Query 283092 ATCTGCATTTTCAT 283105 | | |||||||| Sbjct 4921536 CTGT-AATTTTCAT 4921524 >seq6 Length=3558010 Score = 100 bits (110), Expect = 6e-16 Identities = 107/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || |||| || | || || ||||||||||||||||| | Sbjct 445082 CCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 445141 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || ||||| || ||||| ||||||| ||||| ||||| ||| Sbjct 445142 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 445201 Query 282993 ATACCCTCCTTGTCT-TGGA 283011 || || ||||||||| |||| Sbjct 445202 ATTCCTTCCTTGTCTGTGGA 445221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739039063848