Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 2e-35
seq1 104 2e-17
>seq3
Length=4818847
Score = 163 bits (180), Expect = 2e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| ||| |||| |||||| ||||||||||| |||||||||||||| | ||| ||
Sbjct 1795916 AGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGG 1795975
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || ||||||||||| ||||| || || | || | || |||
Sbjct 1795976 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCC 1796035
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| || |||||| ||| | | | || ||||| | ||||||||||||| |||
Sbjct 1796036 TTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTA 1796095
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || ||||| ||||| ||||||||||||||
Sbjct 1796096 ATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 123 bits (136), Expect = 2e-23
Identities = 170/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| |||||| | ||| || || || || ||||| |||||||||||
Sbjct 1796128 TTGCATACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTA 1796187
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | |||| | | || || || ||||| ||||| ||||||| ||||| || ||
Sbjct 1796188 ATCAGAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTC 1796247
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
| || | |||||||| || ||||| ||| || ||| | |||||||| |
Sbjct 1796248 GGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CGATGGTGTCTGAC 1796305
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||| ||||| ||||| || || |||||||| |||||||| |||||
Sbjct 1796306 GATTCGACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 102 bits (112), Expect = 6e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTC 44187
|| || ||||| || ||||| ||||||||||| ||| | || | ||| | || ||
Sbjct 1796381 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGT-GCGGCCATCCTC 1796439
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | ||| ||||| || | || | |||||||| |||
Sbjct 1796440 AAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTG 1796499
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | ||||| ||| ||| || ||||| | || || |||||
Sbjct 1796500 GATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTT 1796559
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||| |||||||| |||||
Sbjct 1796560 GCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| |||||| ||||||||||| ||| || ||| | || ||
Sbjct 1796609 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1796668
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || || || ||||| | |||||||| || | ||| | |||||||| |||
Sbjct 1796669 AGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGA 1796728
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | ||||| ||| ||| || ||||| | || || ||||||
Sbjct 1796729 ATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTT 1796788
Query 44309 CCCGTGA 44315
|||||||
Sbjct 1796789 CCCGTGA 1796795
>seq1
Length=6490813
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||| || || | || || || ||||| ||||| ||||
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| |||||||| || | ||| | |||||||| ||| ||||| ||| | |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| || ||||||| || || ||||| | || || ||||| |||||||||||||||||||
Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539
Query 44328 AG 44329
||
Sbjct 4921538 AG 4921537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990347351404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |