Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 149 2e-30 seq1 143 6e-29 seq6 100 7e-16 >seq3 Length=4818847 Score = 149 bits (164), Expect = 2e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || || ||||| || || ||| |||||| Sbjct 1796358 CAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCAGAC 1796299 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || ||||| |||||||| || || ||||| || Sbjct 1796298 ACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAACAG 1796239 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || || || ||||| || || || | ||||| ||| || Sbjct 1796238 CGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAACATC 1796179 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||||| ||||| |||||||| | ||||| Sbjct 1796178 CAGAAGGAATCGACACTCCATCTTGTGCTCAGACT 1796144 Score = 147 bits (162), Expect = 5e-30 Identities = 145/186 (78%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| ||||| || |||||||||||||| || | || |||||||| |||||||| Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGT 1796736 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| ||||| || ||||| |||||||| || ||||||||||| || | Sbjct 1796735 CGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGTA 1796676 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 |||| ||||||||||| | || || ||| || ||| |||| || || || || |||| Sbjct 1796675 AACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTGC 1796616 Query 178123 ATCTTG 178128 | |||| Sbjct 1796615 A-CTTG 1796611 Score = 136 bits (150), Expect = 1e-26 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| || ||||| || | || Sbjct 1796586 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGAT 1796527 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct 1796526 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAA 1796467 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || ||||||||||| ||||| ||||| || ||||| | || |||| ||| || ||| | Sbjct 1796466 CGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCAC-CTTGAGCGACTACAACAT 1796408 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || ||||| || || ||||| || Sbjct 1796407 CCAGAAGGAATCTACTCTTCATCTCGT 1796381 >seq1 Length=6490813 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || ||||| || || || |||||||||||||| || || ||||| ||| Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| |||||||| ||||| |||||||| |||||||| ||||| Sbjct 4921598 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACTG 4921657 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || || || || ||||| | || || ||| || ||| |||| || Sbjct 4921658 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716 >seq6 Length=3558010 Score = 100 bits (110), Expect = 7e-16 Identities = 92/115 (80%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| |||||||| ||||| ||||||||||| || ||||||||||| || || |||||| Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || || | || || |||| || ||| ||||||| || || || ||||| |||| Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCA-CTTG 445102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731014926328