Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 149 2e-30
seq1 143 6e-29
seq6 100 7e-16
>seq3
Length=4818847
Score = 149 bits (164), Expect = 2e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || || ||||| || || ||| ||||||
Sbjct 1796358 CAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCAGAC 1796299
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 1796298 ACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAACAG 1796239
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || || || || ||||| || || || | ||||| ||| ||
Sbjct 1796238 CGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAACATC 1796179
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| ||||| |||||||| | |||||
Sbjct 1796178 CAGAAGGAATCGACACTCCATCTTGTGCTCAGACT 1796144
Score = 147 bits (162), Expect = 5e-30
Identities = 145/186 (78%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| ||||| || |||||||||||||| || | || |||||||| ||||||||
Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGT 1796736
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| ||||| || ||||| |||||||| || ||||||||||| || |
Sbjct 1796735 CGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGTA 1796676
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
|||| ||||||||||| | || || ||| || ||| |||| || || || || ||||
Sbjct 1796675 AACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTGC 1796616
Query 178123 ATCTTG 178128
| ||||
Sbjct 1796615 A-CTTG 1796611
Score = 136 bits (150), Expect = 1e-26
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || ||||| || ||||| || | ||
Sbjct 1796586 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGAT 1796527
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| || || || |||||||||
Sbjct 1796526 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAA 1796467
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| ||||||||||| ||||| ||||| || ||||| | || |||| ||| || ||| |
Sbjct 1796466 CGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCAC-CTTGAGCGACTACAACAT 1796408
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
||| || ||||| || || ||||| ||
Sbjct 1796407 CCAGAAGGAATCTACTCTTCATCTCGT 1796381
>seq1
Length=6490813
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || ||||| || || || |||||||||||||| || || ||||| |||
Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| |||||||| ||||| |||||||| |||||||| |||||
Sbjct 4921598 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACTG 4921657
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || || || || ||||| | || || ||| || ||| |||| ||
Sbjct 4921658 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716
>seq6
Length=3558010
Score = 100 bits (110), Expect = 7e-16
Identities = 92/115 (80%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| |||||||| ||||| ||||||||||| || ||||||||||| || || ||||||
Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| || | || || |||| || ||| ||||||| || || || ||||| ||||
Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCA-CTTG 445102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731014926328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |