Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
seq6 102 8e-17
seq1 100 3e-16
>seq3
Length=4818847
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || || |||| || || |||||||||||||| ||||| || || |||
Sbjct 1795907 CCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1795966
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || ||||||||||| || || |||| ||||||||||| | ||||
Sbjct 1795967 AGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 1796026
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| ||| | | | |||||| || |||||
Sbjct 1796027 ATGCCCTCCTTGTCTTGGATCTTCGACTT-GACGTTGTCGATAGTGTCAGAAGATTCCAC 1796085
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || ||||| || || || || ||||| ||||| || |||||
Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 107 bits (118), Expect = 2e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| ||||| || || |||||||| ||||| || || ||||| || | | || ||
Sbjct 1796152 CACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTGCCATCCTC 1796211
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|| |||||||||||||| ||||||||||||||||| | ||||| | ||||||||
Sbjct 1796212 AAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTG 1796271
Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| || ||| || | || | ||||| ||| || || |||| || || ||
Sbjct 1796272 GATCTTGGACTTGACATTGTCG--ATGGTGTCTGACGATTCGACTTCCAGGGTAATGGTC 1796329
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || ||||| ||||| ||||||||
Sbjct 1796330 TTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
>seq6
Length=3558010
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||| ||||| || |||||| || ||||| ||||||||
Sbjct 445082 CCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 445141
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| ||||| |||||||||||||| |||||||| || ||||| | |||
Sbjct 445142 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 445201
Query 41756 ACGCTCTCCTTGTC 41769
| | ||||||||
Sbjct 445202 ATTCCTTCCTTGTC 445215
>seq1
Length=6490813
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| ||||| || | || || || |||||||||||||| |
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||| | || | || ||||||||| ||| || ||| ||| |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTT-GACGTTG 4921600
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||| |||||| ||||| | || || || || ||||| || ||||| |||
Sbjct 4921599 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 4921540
Query 41852 AA 41853
||
Sbjct 4921539 AA 4921538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303930654400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |