Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 134 3e-26
seq1 98.7 2e-15
>seq6
Length=1840879
Score = 134 bits (148), Expect = 3e-26
Identities = 288/420 (69%), Gaps = 8/420 (2%)
Strand=Plus/Plus
Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGG 230261
|| || |||||| | || ||||| |||| ||| ||||||| |||||| || ||| ||
Sbjct 490570 GTCGAGGGTATTTTCTTCTCCGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGGG 490628
Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321
| ||||||| ||||| | || || || ||||| ||||||||||| | || ||
Sbjct 490629 TCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCA-CA 490687
Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAGACGGTC 230379
| | || | | || || || || | | || ||||| | || | | ||
Sbjct 490688 CCGACTTTGCCTGCCTGCTG-ATGCAGCATTTGAAGCACAAGGCAGACCCCGCGCTGATC 490746
Query 230380 AAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCA 230439
|||| ||||| || ||||| || | | ||| ||||| ||| | || ||| ||||
Sbjct 490747 GAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCC 490806
Query 230440 TGTCGCCTTATTGGCA-TGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498
|||| | | |||| | ||||||| | || ||| |||||||||||| ||||| |||||
Sbjct 490807 -GTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGA 490865
Query 230499 CCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATT 230558
|||| | | | || || || || || || |||||| | |||||||||| | ||
Sbjct 490866 CCGCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTT 490925
Query 230559 TATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618
|||||| ||| ||||| || |||||||| |||||||| || |||||| | |||||
Sbjct 490926 CATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTA 490985
>seq1
Length=8684298
Score = 98.7 bits (108), Expect = 2e-15
Identities = 184/267 (69%), Gaps = 5/267 (2%)
Strand=Plus/Minus
Query 319402 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 319461
|| ||||| |||| || || |||||||| | | |||||| || |||| || ||
Sbjct 2563153 TTGACGAAGTCGGCGAGGTTGCCCTTGTAATGCACCAGCTTC---TTCTGTTCATAGTG- 2563098
Query 319462 ATA-ATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520
||| || |||||| || ||||||||||| | |||||||| || || |||| | |
Sbjct 2563097 ATAGATGTCGGTGCATACGGCGTCGAGGAAGGCCGAGTCGTGAGAAACGATCAGCGAGGT 2563038
Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580
| | | || ||| | ||||||| |||||| | || || | || ||||||
Sbjct 2563037 GATTTGCGTATGGTCGTGAAGGTATTGTTGCAACCATTTGACATTGGCTACGTCAAGATG 2562978
Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640
||||||||||||||||| | || | | ||| || ||||| || ||||| | |||
Sbjct 2562977 ATTGGTCGGCTCGTCAAGCAAGAGCACATCGGCGCGCATCAGCATGGCTCGTGCCAAAGC 2562918
Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAG 319667
| ||||| |||||||| || |||||
Sbjct 2562917 CAACTTCATCTTCCACCCACCAGAAAG 2562891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823498525310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |