Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 134 3e-26 seq1 98.7 2e-15 >seq6 Length=1840879 Score = 134 bits (148), Expect = 3e-26 Identities = 288/420 (69%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGG 230261 || || |||||| | || ||||| |||| ||| ||||||| |||||| || ||| || Sbjct 490570 GTCGAGGGTATTTTCTTCTCCGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGGG 490628 Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 | ||||||| ||||| | || || || ||||| ||||||||||| | || || Sbjct 490629 TCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCA-CA 490687 Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAGACGGTC 230379 | | || | | || || || || | | || ||||| | || | | || Sbjct 490688 CCGACTTTGCCTGCCTGCTG-ATGCAGCATTTGAAGCACAAGGCAGACCCCGCGCTGATC 490746 Query 230380 AAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCA 230439 |||| ||||| || ||||| || | | ||| ||||| ||| | || ||| |||| Sbjct 490747 GAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCC 490806 Query 230440 TGTCGCCTTATTGGCA-TGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498 |||| | | |||| | ||||||| | || ||| |||||||||||| ||||| ||||| Sbjct 490807 -GTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGA 490865 Query 230499 CCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATT 230558 |||| | | | || || || || || || |||||| | |||||||||| | || Sbjct 490866 CCGCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTT 490925 Query 230559 TATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618 |||||| ||| ||||| || |||||||| |||||||| || |||||| | ||||| Sbjct 490926 CATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTA 490985 >seq1 Length=8684298 Score = 98.7 bits (108), Expect = 2e-15 Identities = 184/267 (69%), Gaps = 5/267 (2%) Strand=Plus/Minus Query 319402 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 319461 || ||||| |||| || || |||||||| | | |||||| || |||| || || Sbjct 2563153 TTGACGAAGTCGGCGAGGTTGCCCTTGTAATGCACCAGCTTC---TTCTGTTCATAGTG- 2563098 Query 319462 ATA-ATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 ||| || |||||| || ||||||||||| | |||||||| || || |||| | | Sbjct 2563097 ATAGATGTCGGTGCATACGGCGTCGAGGAAGGCCGAGTCGTGAGAAACGATCAGCGAGGT 2563038 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 | | | || ||| | ||||||| |||||| | || || | || |||||| Sbjct 2563037 GATTTGCGTATGGTCGTGAAGGTATTGTTGCAACCATTTGACATTGGCTACGTCAAGATG 2562978 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||||||||||||||||| | || | | ||| || ||||| || ||||| | ||| Sbjct 2562977 ATTGGTCGGCTCGTCAAGCAAGAGCACATCGGCGCGCATCAGCATGGCTCGTGCCAAAGC 2562918 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAG 319667 | ||||| |||||||| || ||||| Sbjct 2562917 CAACTTCATCTTCCACCCACCAGAAAG 2562891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823498525310