Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 7e-38
seq6 113 5e-20
>seq2
Length=8083196
Score = 172 bits (190), Expect = 7e-38
Identities = 626/968 (65%), Gaps = 30/968 (3%)
Strand=Plus/Plus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770
|| || ||||| || || || ||||||| || | | |||| | ||||| |||||
Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983
Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830
| || || | ||| ||||| | ||| | || || ||||| ||||| |||||||||
Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043
Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890
|||||||| ||| ||||||| ||||| || | || || || | ||| || | ||| |
Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103
Query 53891 ACACGAGCCTTTATTATAGATTTGT--ATCTCTT--TTCTCTTTCGTATAGTGTATACAA 53946
| ||||| || | | ||| | ||| | ||| | ||||| || |
Sbjct 1633104 TTCTGGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAG 1633159
Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006
| || |||||||| || | |||| | | ||||| || | || || | |
Sbjct 1633160 TGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAG 1633219
Query 54007 CGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
| ||| ||| | || |||| || || | ||| |||||||| || ||||||| ||
Sbjct 1633220 TGTCCAGTCT---TGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGC 1633276
Query 54064 -TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122
|| || || || | | ||| ||| || || || |||||| || | | |
Sbjct 1633277 GTAGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAA 1633335
Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182
| | | | |||| ||||| ||||| | ||| |||| | | | || || || ||||
Sbjct 1633336 AGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGT 1633395
Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242
| || || || || | |||| |||||||| || |||| | || ||| ||||| | ||
Sbjct 1633396 TGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGAC 1633455
Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAAT 54300
| ||||| | ||||||||| |||| || || || | || || || | | ||
Sbjct 1633456 CGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCAT 1633515
Query 54301 TGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 54360
|| || || || || || || | || ||||| | || || || | || || ||
Sbjct 1633516 TG--AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTA 1633573
Query 54361 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 54420
||| ||||| || ||||| ||| |||||| || | || || |||| |||| |
Sbjct 1633574 GATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTG 1633633
Query 54421 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 54480
| || || || || || | || || |||||||| ||||| || || | ||| | ||
Sbjct 1633634 AGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAG 1633693
Query 54481 ATTGTACGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACAC 54536
|||||||||| ||||| || | ||| || | |||| || || | ||||
Sbjct 1633694 GTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACAC 1633749
Query 54537 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAGCAAGTAGGAT 54595
|||| | ||| ||||| |||| ||| | | |||| ||| || || |||| ||| |||
Sbjct 1633750 GCATGAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGAT 1633808
Query 54596 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACT 54655
|||||| || || || ||||| || | ||| |||||||| || || | |||| |
Sbjct 1633809 CTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCC 1633868
Query 54656 GAGTTGAG 54663
||||| ||
Sbjct 1633869 GAGTTCAG 1633876
>seq6
Length=1840879
Score = 113 bits (124), Expect = 5e-20
Identities = 228/338 (67%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176
||||| | | || || || || || ||| ||| | |||||||| | || | |
Sbjct 490718 AAATGCTGCATCAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGT 490659
Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236
|| ||||| || || || |||||||| || || | || ||||| || ||||||||
Sbjct 490658 TCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCG 490599
Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296
|| || || || |||||||| || || || || || || || | |||| || | |
Sbjct 490598 AAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAG 490539
Query 24297 CCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353
| || | |||| |||||||| ||||||||||| ||||| | || ||
Sbjct 490538 CTGGACTCCTTGTCCGAGATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGA 490479
Query 24354 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413
|| || || || |||| ||||||||| | || | || || || | || || |||
Sbjct 490478 ATCGTGTCAATGGCATCAAAGAGATACTGCTTCTGTTTGGGGTCGTTGATGTACGTGTCA 490419
Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 24451
||||||||||| ||||| ||||| || ||||| |||||
Sbjct 490418 ATCAAAAGACTGTACATCTCCGAGTGGATGTTCTCAAT 490381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721325403760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |