Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 212 6e-50 seq4 123 3e-23 seq3 107 2e-18 >seq6 Length=1840879 Score = 212 bits (234), Expect = 6e-50 Identities = 304/423 (72%), Gaps = 4/423 (1%) Strand=Plus/Plus Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 ||||| || ||||| || ||| || |||| ||||| ||||| || |||||| | Sbjct 490465 GCCATTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCG 490524 Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073 | || ||| || ||||| | | || || ||||| ||||| ||||||||||| | ||| Sbjct 490525 GACAAGGAGTCCAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTC 490584 Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133 || || ||| |||||| |||| || ||||| |||| || || |||||||||||| Sbjct 490585 TTCTCCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTG 490644 Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 || ||| ||| || |||||||| | |||||||| |||| |||||||||||| || Sbjct 490645 ACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTG 490704 Query 117194 CTGTTCAAGCATTTGGTGCA-GCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGA 117252 ||| | |||||||| ||| | | || | | |||| || | ||| ||||||| Sbjct 490705 CTGATGCAGCATTTGAAGCACAAGGCAGA-CCCCGCGCTGATCGAACACATCATCACCGA 490763 Query 117253 CGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACT 117312 || || | ||||||| || ||||| ||||| || || || || | ||| ||||| | Sbjct 490764 AGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAAT 490823 Query 117313 CAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGC 117371 || || || | |||| || ||||||||||||||||||||| | |||||||||| | Sbjct 490824 GAA-CGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCC 490882 Query 117372 TGG 117374 ||| Sbjct 490883 TGG 490885 Score = 132 bits (146), Expect = 5e-26 Identities = 159/213 (75%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 ||||| ||| ||||| || |||||||||| ||| || ||||| |||||||| || Sbjct 490098 TACAAGCGGGCTGAGGCTTCATTCTGGACCGCCGAAGAAGTGGATCTGTCCAAAGATCTT 490157 Query 116708 AGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCC 116764 ||||||| | || |||| || ||||||| ||||| || |||||| |||| Sbjct 490158 CACGACTGGCACAACCGTCTGAATGATGACGAGCGTTATTTCGTCTCGCACGTCTTGGCG 490217 Query 116765 TTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAGGA 116823 || ||||| || ||||||||||||||||||||| ||| ||||||| ||| || | || Sbjct 490218 TTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAACCTGCTCGAGCGCTTTAGCGC-CGA 490276 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856 ||| ||||| | ||||| || |||||||| || Sbjct 490277 GGTCCAGGTCCCGGAGGCACGATGCTTCTATGG 490309 >seq4 Length=4536433 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||||||||||||| | || || ||| | | Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 671379 GACACTATTGACAACG-TGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 671321 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| ||||| || || || |||| || || || ||||||||| Sbjct 671320 ACAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAA 671261 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 671260 CATCCAGAAGGAATCCACTCTTCATCTGGT 671231 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| ||||| || |||| |||||| | | | Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||| || |||| ||||| || ||||| || | ||||| Sbjct 671607 GATACCATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCA 671549 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || || || || |||| |||||| | | ||| ||||| Sbjct 671548 GCAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAA 671489 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| ||||||| || Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGT 671459 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| || || |||||||| |||| |||||| | | ||||| | | | | |||| Sbjct 671873 TCACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAAT 671814 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| || ||||| || | |||||||| || || |||| ||| || | Sbjct 671813 CCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAA 671754 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 | || || || |||| |||||| | | ||||||||||||||| ||||| Sbjct 671753 AGCAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGA 671705 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || || ||||| | || || || || | Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| || ||||| ||| | ||||| Sbjct 671151 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 671093 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| || ||||| || |||| || | ||||| || |||||||| Sbjct 671092 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAA 671033 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| ||| || || Sbjct 671032 CATTCAGAAGGAGAGCACCCTCCA 671009 >seq3 Length=7540789 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || |||||||| | ||||||||||| ||||||| ||| ||||| || || || Sbjct 3360294 GACAAGGAAGGCATCCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGAA 3360353 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || ||| |||||||||||||||||||||| | || ||||| || || | Sbjct 3360354 GACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTCCTC 3360413 Query 40903 CGCTTGAGGGGCGG 40916 ||| || | || || Sbjct 3360414 CGCCTGCGTGGTGG 3360427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218961711120