Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq6 212 6e-50
seq4 123 3e-23
seq3 107 2e-18
>seq6
Length=1840879
Score = 212 bits (234), Expect = 6e-50
Identities = 304/423 (72%), Gaps = 4/423 (1%)
Strand=Plus/Plus
Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013
||||| || ||||| || ||| || |||| ||||| ||||| || |||||| |
Sbjct 490465 GCCATTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCG 490524
Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073
| || ||| || ||||| | | || || ||||| ||||| ||||||||||| | |||
Sbjct 490525 GACAAGGAGTCCAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTC 490584
Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133
|| || ||| |||||| |||| || ||||| |||| || || ||||||||||||
Sbjct 490585 TTCTCCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTG 490644
Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193
|| ||| ||| || |||||||| | |||||||| |||| |||||||||||| ||
Sbjct 490645 ACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTG 490704
Query 117194 CTGTTCAAGCATTTGGTGCA-GCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGA 117252
||| | |||||||| ||| | | || | | |||| || | ||| |||||||
Sbjct 490705 CTGATGCAGCATTTGAAGCACAAGGCAGA-CCCCGCGCTGATCGAACACATCATCACCGA 490763
Query 117253 CGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACT 117312
|| || | ||||||| || ||||| ||||| || || || || | ||| ||||| |
Sbjct 490764 AGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAAT 490823
Query 117313 CAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGC 117371
|| || || | |||| || ||||||||||||||||||||| | |||||||||| |
Sbjct 490824 GAA-CGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCC 490882
Query 117372 TGG 117374
|||
Sbjct 490883 TGG 490885
Score = 132 bits (146), Expect = 5e-26
Identities = 159/213 (75%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707
||||| ||| ||||| || |||||||||| ||| || ||||| |||||||| ||
Sbjct 490098 TACAAGCGGGCTGAGGCTTCATTCTGGACCGCCGAAGAAGTGGATCTGTCCAAAGATCTT 490157
Query 116708 AGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCC 116764
||||||| | || |||| || ||||||| ||||| || |||||| ||||
Sbjct 490158 CACGACTGGCACAACCGTCTGAATGATGACGAGCGTTATTTCGTCTCGCACGTCTTGGCG 490217
Query 116765 TTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAGGA 116823
|| ||||| || ||||||||||||||||||||| ||| ||||||| ||| || | ||
Sbjct 490218 TTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAACCTGCTCGAGCGCTTTAGCGC-CGA 490276
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856
||| ||||| | ||||| || |||||||| ||
Sbjct 490277 GGTCCAGGTCCCGGAGGCACGATGCTTCTATGG 490309
>seq4
Length=4536433
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||||||||||||| | || || ||| | |
Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | || || || | ||||| ||||| ||||| | |||||
Sbjct 671379 GACACTATTGACAACG-TGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 671321
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| | |||| ||| ||||| || || || |||| || || || |||||||||
Sbjct 671320 ACAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAA 671261
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || ||||| ||
Sbjct 671260 CATCCAGAAGGAATCCACTCTTCATCTGGT 671231
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| ||||| || |||| |||||| | | |
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||| || |||| ||||| || ||||| || | |||||
Sbjct 671607 GATACCATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCA 671549
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || || || || |||| |||||| | | ||| |||||
Sbjct 671548 GCAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAA 671489
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||| || |||| ||||||| ||
Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGT 671459
Score = 93.3 bits (102), Expect = 4e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| || || |||||||| |||| |||||| | | ||||| | | | | ||||
Sbjct 671873 TCACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAAT 671814
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| || | ||||| || ||||| || | |||||||| || || |||| ||| || |
Sbjct 671813 CCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAA 671754
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880
| || || || |||| |||||| | | ||||||||||||||| |||||
Sbjct 671753 AGCAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGA 671705
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || || ||||| | || || || || |
Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| || ||||| ||| | |||||
Sbjct 671151 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 671093
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| ||| | |||| || ||||| || |||| || | ||||| || ||||||||
Sbjct 671092 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAA 671033
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| ||||||||| ||| || ||
Sbjct 671032 CATTCAGAAGGAGAGCACCCTCCA 671009
>seq3
Length=7540789
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || |||||||| | ||||||||||| ||||||| ||| ||||| || || ||
Sbjct 3360294 GACAAGGAAGGCATCCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGAA 3360353
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| || || ||| |||||||||||||||||||||| | || ||||| || || |
Sbjct 3360354 GACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTCCTC 3360413
Query 40903 CGCTTGAGGGGCGG 40916
||| || | || ||
Sbjct 3360414 CGCCTGCGTGGTGG 3360427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218961711120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |