Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq6 172 5e-38 seq4 127 2e-24 seq2 82.4 7e-11 >seq6 Length=1840879 Score = 172 bits (190), Expect = 5e-38 Identities = 356/522 (68%), Gaps = 21/522 (4%) Strand=Plus/Plus Query 44786 ATGCCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATA 44845 || |||||| | |||| || ||||| ||||| |||||| || || | || Sbjct 490477 ATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAGGAGTCC 490536 Query 44846 ACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGT 44905 | || ||| ||||| | || || |||||| ||||| || | ||||| || || | Sbjct 490537 AGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCT 490596 Query 44906 TTTGCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAAC 44965 || ||| | || || | |||| | |||||| |||||||||| ||||| || ||| Sbjct 490597 TTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAAT 490656 Query 44966 GAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCT-CTACTATAATAC 45024 ||| | || ||| | ||||| || |||||||| ||||||||||||| || | | | Sbjct 490657 GAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGATGCAGCAT 490716 Query 45025 GAGAGTCGATCAAAAGTTGGA---CGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGT 45081 || | || ||| || ||||| | || ||| |||| || |||||||||| Sbjct 490717 TTGA----AGCACAAGGCAGACCCCGCGCTGATCG--AAC-ACATCATCACCGAAGCCGT 490769 Query 45082 GGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCG--TTGGTGGGAATGAAC 45139 || |||||||| |||||| | | || ||||| |||| ||| || ||||||||||| Sbjct 490770 GGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCG--TCGGCCTGTTGGGAATGAAC 490827 Query 45140 GCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG---TCTTCTCGTCCAGTTA 45196 || || ||||| | ||||||| ||||| |||||||| || || |||| || | Sbjct 490828 GCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCCTGGGC 490887 Query 45197 AAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTG 45256 || | | | | ||| | | ||||||| ||| || ||| | || || ||| | Sbjct 490888 AACAAGCGC---GTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTC 490944 Query 45257 GAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298 | |||||| || ||||| || |||||||| |||||||| ||| Sbjct 490945 GCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986 >seq4 Length=4536433 Score = 127 bits (140), Expect = 2e-24 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||| || |||||||||||||||| ||||| || || || || ||||| Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || |||||||| |||||||| ||||| ||||||||| ||| || ||| Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTG 671590 Query 118662 ACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 || | |||| ||| || |||| |||||||||| || | || |||||||| ||| Sbjct 671591 ACGTTGTCGATGGTATC---GCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGA 671647 Query 118719 GTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| Sbjct 671648 GTCTTGACGAAGATTTGCAT 671667 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | ||||| ||||||||||| || ||| || ||||||||||| || Sbjct 670984 ACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 671043 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | |||||| |||||| | || || || || |||| | ||||| || || || || Sbjct 671044 TAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGG 671103 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||| |||||||| ||| || || || | || | |||||||| | ||| || Sbjct 671104 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||| || || |||||||| || ||||| |||||||| Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 >seq2 Length=8083196 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281 ||||||| ||||| |||||||| || || || || | | |||| ||||| ||| | | Sbjct 1632349 GGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAGG 1632408 Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334 ||||||| ||||||||||||| || ||||| | || | ||| || |||||| Sbjct 1632409 GTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATG 1632461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830204369604