Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 172 5e-38
seq4 127 2e-24
seq2 82.4 7e-11
>seq6
Length=1840879
Score = 172 bits (190), Expect = 5e-38
Identities = 356/522 (68%), Gaps = 21/522 (4%)
Strand=Plus/Plus
Query 44786 ATGCCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATA 44845
|| |||||| | |||| || ||||| ||||| |||||| || || | ||
Sbjct 490477 ATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAGGAGTCC 490536
Query 44846 ACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGT 44905
| || ||| ||||| | || || |||||| ||||| || | ||||| || || |
Sbjct 490537 AGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCT 490596
Query 44906 TTTGCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAAC 44965
|| ||| | || || | |||| | |||||| |||||||||| ||||| || |||
Sbjct 490597 TTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAAT 490656
Query 44966 GAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCT-CTACTATAATAC 45024
||| | || ||| | ||||| || |||||||| ||||||||||||| || | | |
Sbjct 490657 GAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGATGCAGCAT 490716
Query 45025 GAGAGTCGATCAAAAGTTGGA---CGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGT 45081
|| | || ||| || ||||| | || ||| |||| || ||||||||||
Sbjct 490717 TTGA----AGCACAAGGCAGACCCCGCGCTGATCG--AAC-ACATCATCACCGAAGCCGT 490769
Query 45082 GGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCG--TTGGTGGGAATGAAC 45139
|| |||||||| |||||| | | || ||||| |||| ||| || |||||||||||
Sbjct 490770 GGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCG--TCGGCCTGTTGGGAATGAAC 490827
Query 45140 GCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG---TCTTCTCGTCCAGTTA 45196
|| || ||||| | ||||||| ||||| |||||||| || || |||| || |
Sbjct 490828 GCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCCTGGGC 490887
Query 45197 AAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTG 45256
|| | | | | ||| | | ||||||| ||| || ||| | || || ||| |
Sbjct 490888 AACAAGCGC---GTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTC 490944
Query 45257 GAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298
| |||||| || ||||| || |||||||| |||||||| |||
Sbjct 490945 GCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986
>seq4
Length=4536433
Score = 127 bits (140), Expect = 2e-24
Identities = 149/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| || |||||||||||||||| ||||| || || || || |||||
Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || |||||||| |||||||| ||||| ||||||||| ||| || |||
Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTG 671590
Query 118662 ACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718
|| | |||| ||| || |||| |||||||||| || | || |||||||| |||
Sbjct 671591 ACGTTGTCGATGGTATC---GCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGA 671647
Query 118719 GTTTTTACAAAAATCTGCAT 118738
|| || || || || |||||
Sbjct 671648 GTCTTGACGAAGATTTGCAT 671667
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||||| | ||||| ||||||||||| || ||| || ||||||||||| ||
Sbjct 670984 ACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 671043
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| |||||| |||||| | || || || || |||| | ||||| || || || ||
Sbjct 671044 TAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGG 671103
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
||||| |||||||| ||| || || || | || | |||||||| | ||| ||
Sbjct 671104 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||| || || |||||||| || ||||| ||||||||
Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
>seq2
Length=8083196
Score = 82.4 bits (90), Expect = 7e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281
||||||| ||||| |||||||| || || || || | | |||| ||||| ||| | |
Sbjct 1632349 GGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAGG 1632408
Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334
||||||| ||||||||||||| || ||||| | || | ||| || ||||||
Sbjct 1632409 GTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATG 1632461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830204369604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |