Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
>seq4
Length=4536433
Score = 118 bits (130), Expect = 1e-21
Identities = 153/206 (74%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
|||||| ||| || || || || |||||||| || || || |||| || || ||
Sbjct 671464 ATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTG 671523
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
||| || ||||| || || ||||||||||||| || | || |||||||| ||| | |
Sbjct 671524 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT-TGAATCT 671582
Query 43100 TTG-TTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCC 43157
| | ||||| ||| | | | || ||||||||||| || |||| ||| ||||| |||||
Sbjct 671583 TGGATTTGA-CGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCG 671641
Query 43158 GTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || ||||| || |||||||||||
Sbjct 671642 GTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 102 bits (112), Expect = 9e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| ||| | ||| ||||| || || ||||| || | ||||| || |||| ||
Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|| ||||| || ||||| || | ||| || ||||| | || | | ||||||||| |
Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350
Query 43095 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|| || ||| | ||| | || ||||| |||||| ||||| | |||||||||||
Sbjct 671351 ATCTTGGATTTCA-CGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| || |||||||||||
Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|| |||||| || | ||||||||||| ||||| ||||| |||| ||||| || | ||
Sbjct 670999 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATC 671058
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| | ||||| || || || || | |||||| ||||| | || | || ||||||||
Sbjct 671059 CTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 671118
Query 43091 CATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
| ||| | || | |||| ||| | | | ||||| || ||||| || | |||||
Sbjct 671119 C-TGAATCTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATC 671176
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || || ||||| |||||||| |||||
Sbjct 671177 GTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 98.7 bits (108), Expect = 1e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| || ||||| || || || || |||| || || ||||| || |||||
Sbjct 671705 TCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 671764
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||||| || | || ||||||||| ||| || ||||| |
Sbjct 671765 ATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTG 671824
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | |||||||||||||| || |||| ||||||||| || || ||
Sbjct 671825 TCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817335534360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |