Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
>seq4
Length=4536433
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | |||||||| || ||||||||||||||||||||||||||
Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || |||| ||| || ||||| || ||||| ||||||||||| || ||
Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| ||| || ||| || | | | ||||| ||||||
Sbjct 671105 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACT 671164
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || |||||||| || ||||||||||| |||||||| |||||
Sbjct 671165 TCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|| ||||| |||||||| ||| ||| ||| |||| || ||||| |||||||||||
Sbjct 671477 TCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 671536
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| ||||| ||||||||||| | || |||||||| ||| || || ||
Sbjct 671537 ATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTGACGTTG 671596
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | | || | || ||||| | ||||| |||||||| || |||||||| ||
Sbjct 671597 TCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACG 671656
Query 45326 AAGATTTGCAT 45336
|||||||||||
Sbjct 671657 AAGATTTGCAT 671667
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||| || |||||||||||| ||| ||| |||| ||
Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCA 671746
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||||||||| |||| ||||| ||||||||||| | || |||||||||
Sbjct 671747 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 671803
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | ||||| || || ||| |||||||| ||||||||||||
Sbjct 671213 CCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAA 671272
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || |||| || ||||| || || ||||| ||||| || |||||||| || ||
Sbjct 671273 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGG 671332
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| || || || || | | |||| || ||
Sbjct 671333 ATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACA 671392
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || || ||||| || |||||||| || ||||||||||||
Sbjct 671393 TCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075021845777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |