Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 351 9e-92 seq6 141 8e-29 seq4 122 8e-23 >seq2 Length=8083196 Score = 351 bits (388), Expect = 9e-92 Identities = 1011/1545 (65%), Gaps = 36/1545 (2%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || ||||| |||||||| | || ||| ||||| ||| ||||| || ||| | | Sbjct 1632349 GGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAGG 1632408 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 ||||||| |||| ||||| ||||| ||||||| || || || || ||||| || || | Sbjct 1632409 GTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGAGCGA 1632468 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || || ||||| | | || ||||| | ||| | ||| ||| |||||||| Sbjct 1632469 CGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTTAGCGAGTCCCAGTCCC 1632528 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTC 22687 | || || || || || || || ||||||||| || || | | || | |||| Sbjct 1632529 ATAGGTCTGAGGGAGTGACGTT---CCACATATCATACTGGAGGATACCTTGGGAGACT- 1632584 Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCC 22747 |||||||||||||| || ||| || || | | | || ||||| || || Sbjct 1632585 ---GGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGAGGCG 1632641 Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC----GGCGGCGGC 22803 | || ||| || || || |||||||||| | || | || | | ||| Sbjct 1632642 GTGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTGGGTATTGAGTTGACGAGCCTCCGGA 1632701 Query 22804 GACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTAT 22863 || ||| | || | ||||| | ||| || || || | || ||||| || | Sbjct 1632702 GAG----TCGAAAGGAAGACGCAGAGCGAGGAAAGCATCTGCGAGGCCTTGAACACCGAG 1632757 Query 22864 ACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGA 22923 || || ||||||| | | || | || ||||| || | || || | || Sbjct 1632758 GCCAATAGGTCGGTGTCGGAAGTTGCTCTTCTTCGCCTCCGGGACCGGGTAGTAGTTGAC 1632817 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 |||||| | |||||||||| | || || | || | | || Sbjct 1632818 ATCGATGATCTTGTTCAAGTTGCGAGTGACGACTTGGACGACCTCGTGGAGACGACCGAA 1632877 Query 22984 GTCGTAAACGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCA 23040 ||| || |||| | ||| | || || || | ||| | |||||||||||||| Sbjct 1632878 GTCATACTCGCCTCGGGCTTGATCGACGAAAGTGGGAAGGGCCAGGGAGGCAAGATTGCA 1632937 Query 23041 TACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTT 23100 || || ||||| || | ||||| || ||||| || || || | ||| || | Sbjct 1632938 GACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCACAAGTTGGAACTCCG 1632997 Query 23101 TATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160 || || |||| ||| |||||||||| || ||||||| |||||| || |||||||| Sbjct 1632998 GATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTATAAAGCATGTA 1633057 Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220 ||||| || |||||| || ||||||| || || ||||| |||| || | | Sbjct 1633058 TGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGAT 1633117 Query 23221 ACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278 ||| || |||| ||||| | ||||||||| | ||| | || || || ||| || Sbjct 1633118 G-GTCTGTCG-ACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCA 1633175 Query 23279 CCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACA-TTGAGT 23336 ||||| ||| || || || || || | | || || | ||| |||| |||| | Sbjct 1633176 CCGTAGACA-TCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGATT 1633234 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 | || ||||| || ||| || |||||||| |||| || |||||||||| || || | Sbjct 1633235 C-TTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGTG 1633293 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | | || || || |||||| ||||||| || | ||||||||| || ||||| || | Sbjct 1633294 CTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCGT 1633353 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||| || || ||||| | |||||| || || || | ||| ||||| || || ||||| | Sbjct 1633354 GCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACAT 1633413 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 | ||||| ||||||||| | || | ||||| || | |||||||||||| | || Sbjct 1633414 ATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAGGTACCATTGG 1633473 Query 23577 CGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 ||| || | ||||| |||| || | | |||| | | || || ||||| || Sbjct 1633474 TGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGCCAG 1633533 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 | | || || ||||| || || || |||||||||||||| ||||| ||||| || | Sbjct 1633534 CAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCAATGCTATCTT 1633593 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 | || | | | |||||| || || |||| ||| |||| || || |||| ||| | Sbjct 1633594 CCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCGGCGTTGAAGA 1633653 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGG 23816 | |||||| ||||| ||||| | | ||||| || |||||||| | || || Sbjct 1633654 GAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGGTTGTACGTCTGAATAGCCT 1633713 Query 23817 CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT 23876 || | || || ||||| || || | || || ||||| | ||| | || |||| | Sbjct 1633714 TCTCGACATCGTCGCCGTGGATGCCAACGGACACACGCATGAGCATATGCTGTGGTCGTT 1633773 Query 23877 CGACCGTGAC--GC-CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAA 23933 ||| || || | ||| |||| ||| ||||| | || || ||| || || |||| Sbjct 1633774 ---CCGCAACTTGCTTGCCAATCTTGAGCAGGTATGATCTTTCCAGCGTCTTGAAGCCAA 1633830 Query 23934 AATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 | || | ||||| ||||| || || | || || ||||| |||| Sbjct 1633831 AGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCCGAGTTCA 1633875 >seq6 Length=1840879 Score = 141 bits (156), Expect = 8e-29 Identities = 408/618 (66%), Gaps = 26/618 (4%) Strand=Plus/Plus Query 57790 GATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGT 57849 |||| ||||| ||||| ||| | || || || ||||| || | || || |||| Sbjct 490367 GATTCCAAGTCATGATTGAGAACATCCACTCGGAGATGTACAGTCTTTTGATTGACACGT 490426 Query 57850 ACGTGAAGGACAACGACGAGAAAC-GTAGACTGTTCAACGCGATCGAAACAATGCCCGCG 57908 || | || ||| | | |||| | ||| || || | || || || || || ||| Sbjct 490427 ACATCAACGACCCCAAACAGAAGCAGTAT-CTCTTTGATGCCATTGACACGATTCCCTGC 490485 Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965 ||| |||||| || || ||| || | || ||||| | || || ||| ||| Sbjct 490486 ATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCG---GACAAGGAGTCCAGCTTC 490542 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 ||| | | || | ||||||||||||||||| ||||| ||||| || ||| || ||| Sbjct 490543 GCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTCGCG 490602 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| |||||| || ||||||||||||||||| || ||| || | Sbjct 490603 TCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAATGAACTC 490662 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG-- 58143 || |||||||||||||| | || || || ||||| ||||| || | | ||| Sbjct 490663 ATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTG-ATGCAGCATTTGAA 490721 Query 58144 TCAATAAACCGACGCGGGATCGC--ATCTTGGACATTATCACCGAGGCGGTCGCGATCGA 58201 || | | ||| | | ||| ||| |||| |||||||| || || | ||||| Sbjct 490722 GCACAAGGCAGACCCCG---CGCTGATCGAACACATCATCACCGAAGCCGTGGGCATCGA 490778 Query 58202 AAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGAT 58261 || || || | ||||| || || || || | | || | || |||||| | |||| Sbjct 490779 GAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAAGCTGAT 490838 Query 58262 GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGAG 58316 | | ||||||| ||||| || |||||| | || |||||| ||| || || | Sbjct 490839 GCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCCTG---GGCAACAAGCG 490895 Query 58317 CGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAG 58376 |||| |||||| | | || || || || ||| | |||||||||| ||||||| Sbjct 490896 CGTC--TACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCAAG 490953 Query 58377 ACAAACTTTTTCGAAAAA 58394 || || || ||||| ||| Sbjct 490954 ACCAATTTCTTCGAGAAA 490971 >seq4 Length=4536433 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| |||||||| || |||||||| |||||| | || || ||| |||| Sbjct 671440 CATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTC 671381 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || ||| | || |||||||| || | || || ||||| Sbjct 671380 AGACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 671321 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || | || ||||| ||||| || | |||||| ||| | ||| || || Sbjct 671320 ACAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAA 671261 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| ||||||||||||||||| ||||| | || |||| Sbjct 671260 CATCCAGAAGGAATCCACTCTTCATCTGGTACTCAGACTTCGTGGTGGTA 671211 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || || || |||| || ||| || | Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | |||||| | || |||||||||||| | || ||||||||| Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || || | |||||| || |||||||||| ||| Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAAC 671488 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || |||||||| || | ||||| || || |||| | ||||| Sbjct 671487 ATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGG 671441 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || || || || ||||| |||| || ||| || ||||| | || | |||||| Sbjct 671871 ACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAATCC 671812 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||||||| | || |||||||||||||| || || ||||| || || Sbjct 671811 AAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAAAG 671752 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 || | |||||| || ||||||| || ||||| ||||| ||||| ||||| || Sbjct 671751 CAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGAATCTACTCTACAC 671692 Query 31397 CTGGTACT 31404 |||| || Sbjct 671691 TTGGTTCT 671684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766193833040