Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 210 3e-49
seq6 113 6e-20
>seq2
Length=8083196
Score = 210 bits (232), Expect = 3e-49
Identities = 745/1150 (65%), Gaps = 32/1150 (3%)
Strand=Plus/Plus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| || ||||| || || || ||||||| || | | |||| | ||||| |||||
Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
| || || | ||| ||||| | ||| | || || ||||| ||||| |||||||||
Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 63127
|||||||| ||| |||| || ||||| || | ||||| || | ||| || | ||| | |
Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103
Query 63128 GACTCGAGCCTTTATTATAGATTTGT--ATCTC--CTTTCTCTTTCGTATAGAGTATACA 63183
|| | ||||| || | | ||| | ||| | ||| | ||||| || |
Sbjct 1633104 TTCT-GGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGA 1633158
Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243
| ||||||||||| || | |||| | | | ||| || | || || | |
Sbjct 1633159 GTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGA 1633218
Query 63244 ACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63300
| ||| ||| | || |||| || || | ||| |||||||| || ||||||| |
Sbjct 1633219 GTGTCCAGTCT---TGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGG 1633275
Query 63301 C-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63359
| || || || || | || ||| ||| || || || |||||| || | |
Sbjct 1633276 CGTAGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAA 1633334
Query 63360 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63419
|| | | | |||| ||||| ||||| | ||| ||||| | | | || || || |||
Sbjct 1633335 AAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTG 1633394
Query 63420 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63479
|| || || || || | |||| |||||||| || |||| | || ||| ||||| | |
Sbjct 1633395 TTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGA 1633454
Query 63480 CCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAA 63537
||||| || |||||||||| |||| || || || | || || || | | |
Sbjct 1633455 CCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCA 1633514
Query 63538 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63597
||| || || || || || || | || ||||| | || || || | ||||| |
Sbjct 1633515 TTG--AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGT 1633572
Query 63598 AGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63657
|||| || || |||||||| || |||||| || | || || |||| ||||
Sbjct 1633573 AGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTT 1633632
Query 63658 GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63717
||| || || || || || | || || |||||||| ||||| || || | ||| | |
Sbjct 1633633 GAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGA 1633692
Query 63718 GATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACA 63773
| |||||||||| |||||| || | ||| || | |||| || || | |||
Sbjct 1633693 GGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACA 1633748
Query 63774 CGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGAT 63833
||||| | ||| ||||| |||| ||| ||| || ||| || || | || ||| |||
Sbjct 1633749 CGCATGAGCATATGCTGTGGTCGTTCCGCAACTTGCTTGCCAATCTTGAGCAGGTATGAT 1633808
Query 63834 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63893
|||||| || || || ||||| || | ||| |||||||| || || | |||| ||
Sbjct 1633809 CTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCC 1633868
Query 63894 GAATTGAGCTTATCCTTATATTTGTTAACTATATCCAT-GGTAATACTTGAAATAATCGG 63952
|| || |||| || || ||| | || || || | ||| |||||| || ||
Sbjct 1633869 GAGTTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAGG 1633927
Query 63953 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 64012
|| |||| || || ||||| ||||||| | | | ||| | ||| | ||
Sbjct 1633928 GGAGGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGAA 1633987
Query 64013 TAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATA 64072
| | || || || | |||||| || || || | || || | ||| || || ||||| ||
Sbjct 1633988 TTGCTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGTA 1634047
Query 64073 ATCCGGATGT 64082
|| ||||||
Sbjct 1634048 GTCGGGATGT 1634057
>seq6
Length=1840879
Score = 113 bits (124), Expect = 6e-20
Identities = 228/338 (67%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623
||||| | | || || || || || ||| ||||| |||||||| | || | |
Sbjct 490718 AAATGCTGCATCAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGT 490659
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
|| || || || || || |||||||| || || | || ||||| || ||||| |||
Sbjct 490658 TCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCG 490599
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743
|| || ||||| ||||| || || || || || || || || | |||| | | |
Sbjct 490598 AAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAG 490539
Query 33744 CCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800
| || | |||| |||||||| ||||||||||| ||||| | || ||
Sbjct 490538 CTGGACTCCTTGTCCGAGATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGA 490479
Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860
||||| || ||||||| ||||||||| | || | || || || | || || ||
Sbjct 490478 ATCGTGTCAATGGCATCAAAGAGATACTGCTTCTGTTTGGGGTCGTTGATGTACGTGTCA 490419
Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 33898
||||||||||| ||||| ||||| || ||||| |||||
Sbjct 490418 ATCAAAAGACTGTACATCTCCGAGTGGATGTTCTCAAT 490381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817308709360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |