Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq4 104 2e-17 >seq6 Length=1840879 Score = 114 bits (126), Expect = 1e-20 Identities = 341/524 (65%), Gaps = 9/524 (2%) Strand=Plus/Plus Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600 |||||| |||| || | ||||| || | |||||||||||||| |||||| || Sbjct 490469 TTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACA 490528 Query 52601 ACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGttttttt 52660 | | ||| || ||| |||| || || ||||| || || || ||| | || || | Sbjct 490529 AGGAGTCCAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCT 490588 Query 52661 CGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGT 52720 | || ||| ||| | || || | | || | | ||| | ||||||||||| || | Sbjct 490589 CCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCT 490648 Query 52721 TTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATT 52780 | ||| || | || ||||||||||| || |||||||| || ||||| || || Sbjct 490649 TCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTG---- 490704 Query 52781 ATAATACGCGCGTTAAAGAAAAATTGTCATA---TGAAAAAATTCTAGACATGTTTAAAG 52837 | || | || ||| | || | || | | || | |||| | | | Sbjct 490705 CTGATGCAGCATTTGAAGCACAA--GGCAGACCCCGCGCTGATCGAACACATCATCACCG 490762 Query 52838 AGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCA 52897 | ||||| | ||| || || || || | || || ||| | ||||| ||||||| | Sbjct 490763 AAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAA 490822 Query 52898 TGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGC 52957 ||||||| | ||||| ||||||||||||| || || ||| | ||| || | | Sbjct 490823 TGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCC 490882 Query 52958 TCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGC 53017 | || | | ||| || || | |||||||| | || ||| | ||||| |||| Sbjct 490883 TGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGC 490942 Query 53018 TCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||| |||||| || || || ||||||| |||||| ||||| ||| Sbjct 490943 TCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986 >seq4 Length=4536433 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || ||||| || ||||| |||||||||| |||| |||||| || || || || Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || ||||||| || ||||| |||||||| |||||||| ||||| ||| | || | ||| Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT-TGAATCTTGGATTT 671589 Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | || ||| | | || ||||| | || | ||||||||||| | || Sbjct 671590 GACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGT 671649 Query 139747 TTTTACGAATATTTGCATA 139765 || ||||| ||||||||| Sbjct 671650 CTTGACGAAGATTTGCATA 671668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063770570400