Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
seq4 104 2e-17
>seq6
Length=1840879
Score = 114 bits (126), Expect = 1e-20
Identities = 341/524 (65%), Gaps = 9/524 (2%)
Strand=Plus/Plus
Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600
|||||| |||| || | ||||| || | |||||||||||||| |||||| ||
Sbjct 490469 TTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACA 490528
Query 52601 ACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGttttttt 52660
| | ||| || ||| |||| || || ||||| || || || ||| | || || |
Sbjct 490529 AGGAGTCCAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCT 490588
Query 52661 CGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGT 52720
| || ||| ||| | || || | | || | | ||| | ||||||||||| || |
Sbjct 490589 CCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCT 490648
Query 52721 TTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATT 52780
| ||| || | || ||||||||||| || |||||||| || ||||| || ||
Sbjct 490649 TCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTG---- 490704
Query 52781 ATAATACGCGCGTTAAAGAAAAATTGTCATA---TGAAAAAATTCTAGACATGTTTAAAG 52837
| || | || ||| | || | || | | || | |||| | | |
Sbjct 490705 CTGATGCAGCATTTGAAGCACAA--GGCAGACCCCGCGCTGATCGAACACATCATCACCG 490762
Query 52838 AGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCA 52897
| ||||| | ||| || || || || | || || ||| | ||||| ||||||| |
Sbjct 490763 AAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAA 490822
Query 52898 TGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGC 52957
||||||| | ||||| ||||||||||||| || || ||| | ||| || | |
Sbjct 490823 TGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCC 490882
Query 52958 TCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGC 53017
| || | | ||| || || | |||||||| | || ||| | ||||| ||||
Sbjct 490883 TGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGC 490942
Query 53018 TCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
||| |||||| || || || ||||||| |||||| ||||| |||
Sbjct 490943 TCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986
>seq4
Length=4536433
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || ||||| || ||||| |||||||||| |||| |||||| || || || ||
Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| ||||||| || ||||| |||||||| |||||||| ||||| ||| | || | |||
Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT-TGAATCTTGGATTT 671589
Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | || ||| | | || ||||| | || | ||||||||||| | ||
Sbjct 671590 GACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGT 671649
Query 139747 TTTTACGAATATTTGCATA 139765
|| ||||| |||||||||
Sbjct 671650 CTTGACGAAGATTTGCATA 671668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063770570400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |