Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 199 6e-46 seq6 131 2e-25 >seq2 Length=8083196 Score = 199 bits (220), Expect = 6e-46 Identities = 742/1147 (65%), Gaps = 26/1147 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || || ||||| || || || ||||||| || | | |||| | || || ||||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 | ||| || | || ||||| | ||| | || || ||||| ||||| ||||||||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 |||||||| ||| | || || ||||| || | ||||| || | ||| || | ||| | | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACA-G 1633102 Query 79801 ACTC-GAGCCTTTATTATAGACT-TGTATCTCTT--TTCTCTTTCGTATTGTGTATATAA 79856 || | ||||| || | || | | ||| | ||| | ||||| | || | Sbjct 1633103 CTTCTGGGCCTTGATGGT---CTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAG 1633159 Query 79857 TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAA 79916 | ||||||||||| || | ||||| | | ||||| |||| || || | | Sbjct 1633160 TGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAG 1633219 Query 79917 CGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TA 79975 | ||| ||| || | || || || | ||| |||||||| || ||||||| || || Sbjct 1633220 TGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTA 1633279 Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035 || || || | | ||| || || || || |||||| || | | || Sbjct 1633280 GAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGT 1633338 Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095 | | | |||| ||||| ||||| | ||| ||||| | | | || || || ||||| | Sbjct 1633339 CAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGC 1633398 Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155 | || || || | |||| |||||||| || |||| | || ||| ||||| | ||| | Sbjct 1633399 CACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGT 1633458 Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 80213 |||| ||||||||||| |||| || || || | || || || | | |||| Sbjct 1633459 TGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTG- 1633517 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 || || || || || || | || ||||| | || || || | || || ||||| Sbjct 1633518 -AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGAT 1633576 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 ||||| |||||||| || |||||| || | || || |||| |||| || Sbjct 1633577 ACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGG 1633636 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || || || || || | || || |||||||| ||||| || || | ||||| || || Sbjct 1633637 TGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGGTT 1633696 Query 80394 GTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGCA 80449 |||||||| |||||| || | ||| || | |||| || || | ||||||| Sbjct 1633697 GTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACACGCA 1633752 Query 80450 TTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTT 80508 | | ||| ||||| |||| ||| | | |||| || || || | || ||| ||| || Sbjct 1633753 TGAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGATCTT 1633811 Query 80509 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568 |||| || || || ||||| || | ||| |||||||| || || | |||| ||||| Sbjct 1633812 TCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCCGAG 1633871 Query 80569 TTGAGTTTATCCTTATATTTGTTAACTACATCCAT-GGTGATACTTGAAATAATCGGAGA 80627 || || | || || ||| | || | || | ||| |||||| || || || Sbjct 1633872 TTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAGGGGA 1633930 Query 80628 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 80687 |||| || || ||||| ||||||| | | | ||| | ||| | ||| | Sbjct 1633931 GGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGAATTG 1633990 Query 80688 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATC 80747 || || || | |||||| || || || || || || | ||| || | ||||| || || Sbjct 1633991 CTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGTAGTC 1634050 Query 80748 TGGATGT 80754 |||||| Sbjct 1634051 GGGATGT 1634057 >seq6 Length=1840879 Score = 131 bits (144), Expect = 2e-25 Identities = 232/338 (69%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 49942 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 50001 ||||| | | || || || || || ||| ||||| |||||||| | || ||| Sbjct 490718 AAATGCTGCATCAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGT 490659 Query 50002 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 50061 || ||||| || || || |||||||| || || | || ||||| || |||||||| Sbjct 490658 TCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCG 490599 Query 50062 AATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAA 50121 || || || || ||||| || || || || ||||| || || || |||| | | | Sbjct 490598 AAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAG 490539 Query 50122 CTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 50178 |||| | |||| |||||||| ||||||||||| ||||| | || || Sbjct 490538 CTGGACTCCTTGTCCGAGATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGA 490479 Query 50179 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 50238 ||||| || ||||||| ||||||||| | || | || || || | || || || Sbjct 490478 ATCGTGTCAATGGCATCAAAGAGATACTGCTTCTGTTTGGGGTCGTTGATGTACGTGTCA 490419 Query 50239 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 50276 ||||||||||| ||||| ||||| || ||||| ||||| Sbjct 490418 ATCAAAAGACTGTACATCTCCGAGTGGATGTTCTCAAT 490381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268467800680