Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 203 4e-47 >seq2 Length=8083196 Score = 203 bits (224), Expect = 4e-47 Identities = 767/1185 (65%), Gaps = 30/1185 (3%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763 || || ||||| || || || ||||||| || ||| |||| | ||| || ||||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823 | || || | ||| ||||| | ||| | || || ||||| ||||| ||||||||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 71882 |||||||| || | || || ||||| || | ||||| || | ||| || | ||| | | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103 Query 71883 GACTCGAGCCTTTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAAT 71940 || | ||||| || | | | | ||| | ||| | ||||| | || | | Sbjct 1633104 TTCT-GGGCCTTGATGGTCT--GTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGT 1633160 Query 71941 CGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAAT 72000 ||||||||||| || | ||| | | ||||| || | || || | | | Sbjct 1633161 GCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGT 1633220 Query 72001 GACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TAT 72059 | ||| ||| || | | || || | ||| |||||||| || ||||||| || || Sbjct 1633221 GTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAG 1633280 Query 72060 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 72119 || || || | | ||| || || || || |||||| || | | || | Sbjct 1633281 AACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTC 1633339 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | | |||| ||||| ||||| | ||| ||||| | | | || || || ||||| || Sbjct 1633340 AAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCC 1633399 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 || || || | |||| |||||||| || |||| | || ||| ||||| | ||| || Sbjct 1633400 ACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTT 1633459 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGAT 72297 ||| | ||||||||| |||| || || || | || || || | || |||| Sbjct 1633460 GGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTG-- 1633517 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 || || || || || || | || ||||| | || || || | || || ||||| Sbjct 1633518 AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATA 1633577 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 72417 ||||| || ||||| ||| |||||| || | || || |||| |||| || Sbjct 1633578 CCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGT 1633637 Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 || || || || || | || || |||||||| ||||| || || | ||||| || ||| Sbjct 1633638 GTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGGTTG 1633697 Query 72478 TACGTCTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCAT 72533 ||||||| |||||| || | ||| || | |||| || || | |||||||| Sbjct 1633698 TACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACACGCAT 1633753 Query 72534 TAACATATGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAGGATTTTT 72592 | ||||||||| |||| ||| | | |||| || || || | || ||| ||| ||| Sbjct 1633754 GAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGATCTTT 1633812 Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 ||| || || || ||||| || | ||| |||||||| || || | |||| |||| | Sbjct 1633813 CCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCCGAGT 1633872 Query 72653 TGAGTTTATCCTTATATTTGTTAACTATATCCAT-GGTGATACTTGAAATAATCGGAGAA 72711 | || | || || ||| | || || || | ||| |||||| || || || Sbjct 1633873 TCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAGGGGAG 1633931 Query 72712 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 72771 |||| || || ||||| ||||||| | | | ||| | ||| | ||| | Sbjct 1633932 GGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGAATTGC 1633991 Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 || || || | |||||| || || || || || || | ||| || || ||||| || || Sbjct 1633992 TTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGTAGTCG 1634051 Query 72832 GGATGT-TG--TGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGA 72873 |||||| || ||| || | |||||| ||||||| ||| || Sbjct 1634052 GGATGTGTGACTGTCATATA---GGCTGCAGTTTCTGCAGCCTGA 1634093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138889598120