Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 212 9e-50 >seq6 Length=1840879 Score = 212 bits (234), Expect = 9e-50 Identities = 429/632 (68%), Gaps = 15/632 (2%) Strand=Plus/Plus Query 125242 GATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGT 125301 |||||||| |||||||||||||| | |||||||| |||||| | ||||||||| || Sbjct 490367 GATTCCAAGTCATGATTGAGAACATCCACTCGGAGATGTACAGTCTTTTGATTGACACGT 490426 Query 125302 ACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTA 125361 |||| ||| || ||| || || |||||| | || || |||||| | || | | Sbjct 490427 ACATCAACGACCCCAAACAGAAGCAGTATCTCTTTGATGCCATTGACACGATTCCCTGCA 490486 Query 125362 TACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCG 125421 | || || || || | |||| | ||||||| ||| | |||| | |||| Sbjct 490487 TCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAGGAGTCCAGCTTCGCCC 490546 Query 125422 ACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCA 125481 | |||| ||||| ||||||||||| ||||| || ||||| || || ||| ||| ||| Sbjct 490547 AACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTCGCGTCCA 490606 Query 125482 TCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATAT 125541 |||| ||||| |||| || || |||||||| ||||| | || || | || | Sbjct 490607 TCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCT 490666 Query 125542 CTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTC 125601 | || ||||||||| | ||| ||||||||| || ||| | ||| | || || | Sbjct 490667 CGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGAT--GCAGC-ATTTGAAGC 490723 Query 125602 CCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAG 125661 | || ||||| || ||| ||| || |||| | ||||| |||||| | || | Sbjct 490724 ACAAG-GCAGACCCCGCGCTGA-----TCGAACACATCATCACCGAAGCCGTGGGCATCG 490777 Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAA 125721 | | || || || ||||| | || || ||| || || | || |||||| |||||| | Sbjct 490778 AGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAAGCTGA 490837 Query 125722 TGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAG- 125780 || ||||||| ||||| || || || || || ||| || || ||| |||| Sbjct 490838 TGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCCTG---GGCAACAAGC 490894 Query 125781 --ATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 | ||||||||| |||| ||||| |||||| | ||| || || | ||| |||| Sbjct 490895 GCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCAAGA 490954 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 |||| || |||||||| ||| |||| ||| Sbjct 490955 CCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 125031 TACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTG 125090 ||||| |||| |||| || || ||||| | |||||| || ||||||||||| || || Sbjct 490098 TACAAGCGGGCTGAGGCTTCATTCTGGACCGCCGAAGAAGTGGATCTGTCCAAAGATCTT 490157 Query 125091 TACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCC 125150 |||| ||| | | ||| ||| ||| ||||| | || | |||||| | ||||| Sbjct 490158 CACGACTGGCACAACCGTCTGAATGATGACGAGCGTTATTTCGTCTCGCACGTCTTGGCG 490217 Query 125151 TTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 ||||| || | ||||| || ||||||||||| || ||| Sbjct 490218 TTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAACCTG 490256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058857260120