Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 212 9e-50
>seq6
Length=1840879
Score = 212 bits (234), Expect = 9e-50
Identities = 429/632 (68%), Gaps = 15/632 (2%)
Strand=Plus/Plus
Query 125242 GATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGT 125301
|||||||| |||||||||||||| | |||||||| |||||| | ||||||||| ||
Sbjct 490367 GATTCCAAGTCATGATTGAGAACATCCACTCGGAGATGTACAGTCTTTTGATTGACACGT 490426
Query 125302 ACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTA 125361
|||| ||| || ||| || || |||||| | || || |||||| | || | |
Sbjct 490427 ACATCAACGACCCCAAACAGAAGCAGTATCTCTTTGATGCCATTGACACGATTCCCTGCA 490486
Query 125362 TACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCG 125421
| || || || || | |||| | ||||||| ||| | |||| | ||||
Sbjct 490487 TCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAGGAGTCCAGCTTCGCCC 490546
Query 125422 ACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCA 125481
| |||| ||||| ||||||||||| ||||| || ||||| || || ||| ||| |||
Sbjct 490547 AACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTCGCGTCCA 490606
Query 125482 TCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATAT 125541
|||| ||||| |||| || || |||||||| ||||| | || || | || |
Sbjct 490607 TCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCT 490666
Query 125542 CTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTC 125601
| || ||||||||| | ||| ||||||||| || ||| | ||| | || || |
Sbjct 490667 CGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGAT--GCAGC-ATTTGAAGC 490723
Query 125602 CCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAG 125661
| || ||||| || ||| ||| || |||| | ||||| |||||| | || |
Sbjct 490724 ACAAG-GCAGACCCCGCGCTGA-----TCGAACACATCATCACCGAAGCCGTGGGCATCG 490777
Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAA 125721
| | || || || ||||| | || || ||| || || | || |||||| |||||| |
Sbjct 490778 AGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAAGCTGA 490837
Query 125722 TGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAG- 125780
|| ||||||| ||||| || || || || || ||| || || ||| ||||
Sbjct 490838 TGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGCCCTG---GGCAACAAGC 490894
Query 125781 --ATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838
| ||||||||| |||| ||||| |||||| | ||| || || | ||| ||||
Sbjct 490895 GCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCAAGA 490954
Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
|||| || |||||||| ||| |||| |||
Sbjct 490955 CCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986
Score = 93.3 bits (102), Expect = 6e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 125031 TACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTG 125090
||||| |||| |||| || || ||||| | |||||| || ||||||||||| || ||
Sbjct 490098 TACAAGCGGGCTGAGGCTTCATTCTGGACCGCCGAAGAAGTGGATCTGTCCAAAGATCTT 490157
Query 125091 TACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCC 125150
|||| ||| | | ||| ||| ||| ||||| | || | |||||| | |||||
Sbjct 490158 CACGACTGGCACAACCGTCTGAATGATGACGAGCGTTATTTCGTCTCGCACGTCTTGGCG 490217
Query 125151 TTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189
||||| || | ||||| || ||||||||||| || |||
Sbjct 490218 TTCTTCGCTGCTTCCGACGGCATCGTCAACGAGAACCTG 490256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058857260120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |