Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 134 3e-26 seq2 132 1e-25 >seq4 Length=4536433 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| || || ||||||||||| || || || || | || | |||||| Sbjct 671456 AGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCT 671515 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||| || || || || | ||| || || ||||| || ||||| || || Sbjct 671516 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT 671575 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | ||| || || || | ||||||||| | ||| ||||| || ||||| ||| Sbjct 671576 TGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTC 671635 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || ||||| Sbjct 671636 TTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 114 bits (126), Expect = 3e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || |||||||||||||| | || || || | ||| || || ||||| Sbjct 671021 TCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAG 671080 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | |||||| || || || || ||||| || ||||||||||| | || || || Sbjct 671081 ATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTG 671140 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||| || | ||| || || |||| || || ||||| ||||| || || || || Sbjct 671141 TCAATGGTGTC-CGAGGACTCCACTTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGAC 671199 Query 104548 AAATATCTGCAT 104559 ||| |||||||| Sbjct 671200 AAAGATCTGCAT 671211 >seq2 Length=8083196 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 ||||| || || || | || || || || ||||||| |||||| || ||||||||||| Sbjct 3687732 CTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACCA 3687791 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 || |||| ||| ||||| || || || | || |||||||| || || || || || ||| Sbjct 3687792 TCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTTA 3687851 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || || ||||| | || ||||| || || || ||||| | ||| ||||| |||||||| Sbjct 3687852 TCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAATG 3687911 Query 104525 GTCTTACCAGT 104535 ||||| || || Sbjct 3687912 GTCTTGCCGGT 3687922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397854165196