Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 3e-26
seq2 132 1e-25
>seq4
Length=4536433
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| || || ||||||||||| || || || || | || | ||||||
Sbjct 671456 AGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCT 671515
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||| || || || || | ||| || || ||||| || ||||| || ||
Sbjct 671516 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT 671575
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | ||| || || || | ||||||||| | ||| ||||| || ||||| |||
Sbjct 671576 TGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTC 671635
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| || || || || || |||||
Sbjct 671636 TTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 114 bits (126), Expect = 3e-20
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || |||||||||||||| | || || || | ||| || || |||||
Sbjct 671021 TCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAG 671080
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| | | |||||| || || || || ||||| || ||||||||||| | || || ||
Sbjct 671081 ATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTG 671140
Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | ||| || | ||| || || |||| || || ||||| ||||| || || || ||
Sbjct 671141 TCAATGGTGTC-CGAGGACTCCACTTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGAC 671199
Query 104548 AAATATCTGCAT 104559
||| ||||||||
Sbjct 671200 AAAGATCTGCAT 671211
>seq2
Length=8083196
Score = 132 bits (146), Expect = 1e-25
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
||||| || || || | || || || || ||||||| |||||| || |||||||||||
Sbjct 3687732 CTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACCA 3687791
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
|| |||| ||| ||||| || || || | || |||||||| || || || || || |||
Sbjct 3687792 TCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTTA 3687851
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
|| || ||||| | || ||||| || || || ||||| | ||| ||||| ||||||||
Sbjct 3687852 TCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAATG 3687911
Query 104525 GTCTTACCAGT 104535
||||| || ||
Sbjct 3687912 GTCTTGCCGGT 3687922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397854165196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |