Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq5 89.7 5e-13 >seq4 Length=4536433 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || || ||||||||| | || ||||| || | ||| || || | |||| | Sbjct 670996 TCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCC 671055 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| || || ||| ||||||| |||| || || ||||| ||||| ||||| || Sbjct 671056 ATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTT 671115 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || | ||||||| | | | ||||| | | || || || | ||||| Sbjct 671116 GTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGAT 671175 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||| || |||||||||||||| Sbjct 671176 CGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||||||| | ||| || ||||||| ||| | || || Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCA 671746 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || |||||| | ||||| | | ||||| || |||||||| ||||| ||||| | Sbjct 671747 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 671806 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTT 94977 || || | ||||| | | | ||||| || | ||||| || | ||||||||| || Sbjct 671807 ATCTTGGATTTGACATTGTCAATGGTGTC-GCTCGATTCGACCTCGAGCGTGATGGTCTT 671865 Query 94978 TCCAGT 94983 ||| || Sbjct 671866 TCCGGT 671871 >seq5 Length=4186638 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || |||||||| | || ||||| |||||||| || ||||||||||| Sbjct 1000384 ATCCTCTAGCTGCTTCCCGCCAAACACCAACCTTTGTTGATCTGGCGGTATACCTTCTTT 1000443 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGA 94940 ||| | |||||| || ||||| |||| || Sbjct 1000444 GTCTTGAATTTTGGCTTTGACCGCGCTGA 1000472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290992665320