Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 1e-19
seq5 89.7 5e-13
>seq4
Length=4536433
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| || ||||||||| | || ||||| || | ||| || || | |||| |
Sbjct 670996 TCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCC 671055
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||| || || ||| ||||||| |||| || || ||||| ||||| ||||| ||
Sbjct 671056 ATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTT 671115
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || | ||||||| | | | ||||| | | || || || | |||||
Sbjct 671116 GTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGAT 671175
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| ||||| || ||||||||||||||
Sbjct 671176 CGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | ||||||||||||||| | ||| || ||||||| ||| | || ||
Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCA 671746
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|| || |||||| | ||||| | | ||||| || |||||||| ||||| ||||| |
Sbjct 671747 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 671806
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTT 94977
|| || | ||||| | | | ||||| || | ||||| || | ||||||||| ||
Sbjct 671807 ATCTTGGATTTGACATTGTCAATGGTGTC-GCTCGATTCGACCTCGAGCGTGATGGTCTT 671865
Query 94978 TCCAGT 94983
||| ||
Sbjct 671866 TCCGGT 671871
>seq5
Length=4186638
Score = 89.7 bits (98), Expect = 5e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| || |||||||| | || ||||| |||||||| || |||||||||||
Sbjct 1000384 ATCCTCTAGCTGCTTCCCGCCAAACACCAACCTTTGTTGATCTGGCGGTATACCTTCTTT 1000443
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGA 94940
||| | |||||| || ||||| |||| ||
Sbjct 1000444 GTCTTGAATTTTGGCTTTGACCGCGCTGA 1000472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290992665320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |