Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 2e-34
seq2 150 3e-32
>seq3
Length=7540789
Score = 158 bits (174), Expect = 2e-34
Identities = 138/169 (82%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||||| | || || |||||||| || ||||||||||| || ||
Sbjct 2667409 GCGAAGCGTCATCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCTGCCAT 2667351
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| ||||||||| |||| | || |||| |||||||
Sbjct 2667350 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 2667291
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600
|| | ||| ||||||| ||||||| || ||| |||| ||||||| ||
Sbjct 2667290 CCGAGGTGTCTTGAAGACCTTCCTCGAGGGCGTCATCCGTGATGCTGTC 2667242
>seq2
Length=8083196
Score = 150 bits (166), Expect = 3e-32
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || |||||||||||||||||
Sbjct 5815935 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCAGCTAT 5815993
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || ||||||||||| ||||||||| |||| | || |||| |||||||
Sbjct 5815994 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 5816053
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| | | || || | ||| || || ||| |||||
Sbjct 5816054 CCGGGGTGTCCTTAAGTCCTTCCTCGAATCTGTCATTCGTGACGCCGTCACCTACACCGA 5816113
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
||||| || | ||||| ||||||||
Sbjct 5816114 ACACGCAAAGAGAAAGACCGTCACCTC 5816140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075166170641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |