Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 158 2e-34 seq2 150 3e-32 >seq3 Length=7540789 Score = 158 bits (174), Expect = 2e-34 Identities = 138/169 (82%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||||| | || || |||||||| || ||||||||||| || || Sbjct 2667409 GCGAAGCGTCATCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCTGCCAT 2667351 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 2667350 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 2667291 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || | ||| ||||||| ||||||| || ||| |||| ||||||| || Sbjct 2667290 CCGAGGTGTCTTGAAGACCTTCCTCGAGGGCGTCATCCGTGATGCTGTC 2667242 >seq2 Length=8083196 Score = 150 bits (166), Expect = 3e-32 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||||||||| Sbjct 5815935 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCAGCTAT 5815993 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || ||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 5815994 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 5816053 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| ||||||| | | || || | ||| || || ||| ||||| Sbjct 5816054 CCGGGGTGTCCTTAAGTCCTTCCTCGAATCTGTCATTCGTGACGCCGTCACCTACACCGA 5816113 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 ||||| || | ||||| |||||||| Sbjct 5816114 ACACGCAAAGAGAAAGACCGTCACCTC 5816140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075166170641