Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 214 2e-50
seq6 116 5e-21
>seq2
Length=8083196
Score = 214 bits (236), Expect = 2e-50
Identities = 748/1151 (65%), Gaps = 34/1151 (3%)
Strand=Plus/Plus
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
|| || ||||| || || || ||||||| || | | |||| | ||||| |||||
Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
| || || | ||| ||||| | ||| | || || ||||| ||||| |||||||||
Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077
|||||||| ||| |||| || ||||| || | ||||| || | ||| || | ||| | |
Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACA-G 1633102
Query 63078 ACTC-GAGCCTTTATTATAGATTTGT--ATCTCCT--TTCTCTTTCGTATAGTGTATACA 63132
|| | ||||| || | | ||| | ||| | ||| | ||||| || |
Sbjct 1633103 CTTCTGGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGA 1633158
Query 63133 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 63192
| ||||||||||| || | |||| | | ||||| || | || || | |
Sbjct 1633159 GTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGA 1633218
Query 63193 ACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249
| ||| ||| | || |||| || || | ||| |||||||| || ||||||| |
Sbjct 1633219 GTGTCCAGTCT---TGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGG 1633275
Query 63250 C-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63308
| || || || || | | ||| ||| || || || |||||| || | |
Sbjct 1633276 CGTAGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAA 1633334
Query 63309 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63368
|| | | | |||| ||||| ||||| | ||| ||||| | | | || || || |||
Sbjct 1633335 AAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTG 1633394
Query 63369 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63428
|| || || || || | |||| |||||||| || |||| | || ||| ||||| | |
Sbjct 1633395 TTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGA 1633454
Query 63429 CCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAA 63486
||||| || |||||||||| |||| || || || | || || || | | |
Sbjct 1633455 CCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCA 1633514
Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63546
|||| | || || || || || | || ||||| | || || || | ||||| |
Sbjct 1633515 TTGA--GTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGT 1633572
Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606
|||||||||| |||||||| || |||||| || | || || |||| ||||
Sbjct 1633573 AGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTT 1633632
Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666
|| || || || || || | || || |||||||| ||||| || || | ||| | |
Sbjct 1633633 GAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGA 1633692
Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACA 63722
| |||||||||| |||||| || | ||| || | |||| || || | |||
Sbjct 1633693 GGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACA 1633748
Query 63723 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGA 63781
||||| | ||| ||||| |||| ||| | | |||| ||| || || | || ||| ||
Sbjct 1633749 CGCATGAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGA 1633807
Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841
| |||||| || || || ||||| || | ||| |||||||| || || | |||| |
Sbjct 1633808 TCTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGC 1633867
Query 63842 CGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCAT-GGTGATACTTGAAATAATCG 63900
|||||| || | || || ||| | || || || | ||| |||||| || |
Sbjct 1633868 CGAGTTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAG 1633926
Query 63901 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 63960
| || |||| || || ||||| ||||||| | | | ||| | ||| | |
Sbjct 1633927 GGGAGGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGA 1633986
Query 63961 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 64020
|| | || || || | |||||| || || || || || || | ||| || || ||||| |
Sbjct 1633987 ATTGCTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGT 1634046
Query 64021 AATCCGGATGT 64031
| || ||||||
Sbjct 1634047 AGTCGGGATGT 1634057
>seq6
Length=1840879
Score = 116 bits (128), Expect = 5e-21
Identities = 229/338 (68%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345
||||| | | || || || || || ||| ||||| |||||||| | || |||
Sbjct 490718 AAATGCTGCATCAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGT 490659
Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405
|| ||||| || || || |||||||| || || | || ||||| || ||||| |||
Sbjct 490658 TCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCG 490599
Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33465
|| || || || ||||| || || || || || || || || | |||| | | |
Sbjct 490598 AAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAG 490539
Query 33466 CCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522
| || | |||| |||||||| ||||||||||| ||||| | || ||
Sbjct 490538 CTGGACTCCTTGTCCGAGATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGA 490479
Query 33523 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33582
||||| || ||||||| ||||||||| | || | || || || | || || ||
Sbjct 490478 ATCGTGTCAATGGCATCAAAGAGATACTGCTTCTGTTTGGGGTCGTTGATGTACGTGTCA 490419
Query 33583 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 33620
||||||||||| ||||| ||||| || ||||| |||||
Sbjct 490418 ATCAAAAGACTGTACATCTCCGAGTGGATGTTCTCAAT 490381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946911886920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |