Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 214 2e-50 seq6 116 5e-21 >seq2 Length=8083196 Score = 214 bits (236), Expect = 2e-50 Identities = 748/1151 (65%), Gaps = 34/1151 (3%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || || ||||| || || || ||||||| || | | |||| | ||||| ||||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 | || || | ||| ||||| | ||| | || || ||||| ||||| ||||||||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 |||||||| ||| |||| || ||||| || | ||||| || | ||| || | ||| | | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACA-G 1633102 Query 63078 ACTC-GAGCCTTTATTATAGATTTGT--ATCTCCT--TTCTCTTTCGTATAGTGTATACA 63132 || | ||||| || | | ||| | ||| | ||| | ||||| || | Sbjct 1633103 CTTCTGGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGA 1633158 Query 63133 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 63192 | ||||||||||| || | |||| | | ||||| || | || || | | Sbjct 1633159 GTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGA 1633218 Query 63193 ACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249 | ||| ||| | || |||| || || | ||| |||||||| || ||||||| | Sbjct 1633219 GTGTCCAGTCT---TGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGG 1633275 Query 63250 C-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63308 | || || || || | | ||| ||| || || || |||||| || | | Sbjct 1633276 CGTAGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAA 1633334 Query 63309 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63368 || | | | |||| ||||| ||||| | ||| ||||| | | | || || || ||| Sbjct 1633335 AAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTG 1633394 Query 63369 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63428 || || || || || | |||| |||||||| || |||| | || ||| ||||| | | Sbjct 1633395 TTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGA 1633454 Query 63429 CCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAA 63486 ||||| || |||||||||| |||| || || || | || || || | | | Sbjct 1633455 CCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCA 1633514 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63546 |||| | || || || || || | || ||||| | || || || | ||||| | Sbjct 1633515 TTGA--GTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGT 1633572 Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606 |||||||||| |||||||| || |||||| || | || || |||| |||| Sbjct 1633573 AGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTT 1633632 Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666 || || || || || || | || || |||||||| ||||| || || | ||| | | Sbjct 1633633 GAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGA 1633692 Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACA 63722 | |||||||||| |||||| || | ||| || | |||| || || | ||| Sbjct 1633693 GGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACA 1633748 Query 63723 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGA 63781 ||||| | ||| ||||| |||| ||| | | |||| ||| || || | || ||| || Sbjct 1633749 CGCATGAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGA 1633807 Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841 | |||||| || || || ||||| || | ||| |||||||| || || | |||| | Sbjct 1633808 TCTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGC 1633867 Query 63842 CGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCAT-GGTGATACTTGAAATAATCG 63900 |||||| || | || || ||| | || || || | ||| |||||| || | Sbjct 1633868 CGAGTTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAG 1633926 Query 63901 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 63960 | || |||| || || ||||| ||||||| | | | ||| | ||| | | Sbjct 1633927 GGGAGGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGA 1633986 Query 63961 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 64020 || | || || || | |||||| || || || || || || | ||| || || ||||| | Sbjct 1633987 ATTGCTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGT 1634046 Query 64021 AATCCGGATGT 64031 | || |||||| Sbjct 1634047 AGTCGGGATGT 1634057 >seq6 Length=1840879 Score = 116 bits (128), Expect = 5e-21 Identities = 229/338 (68%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 ||||| | | || || || || || ||| ||||| |||||||| | || ||| Sbjct 490718 AAATGCTGCATCAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGT 490659 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 || ||||| || || || |||||||| || || | || ||||| || ||||| ||| Sbjct 490658 TCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCG 490599 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33465 || || || || ||||| || || || || || || || || | |||| | | | Sbjct 490598 AAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAG 490539 Query 33466 CCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522 | || | |||| |||||||| ||||||||||| ||||| | || || Sbjct 490538 CTGGACTCCTTGTCCGAGATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGA 490479 Query 33523 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33582 ||||| || ||||||| ||||||||| | || | || || || | || || || Sbjct 490478 ATCGTGTCAATGGCATCAAAGAGATACTGCTTCTGTTTGGGGTCGTTGATGTACGTGTCA 490419 Query 33583 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 33620 ||||||||||| ||||| ||||| || ||||| ||||| Sbjct 490418 ATCAAAAGACTGTACATCTCCGAGTGGATGTTCTCAAT 490381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946911886920