Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq4 95.1 1e-14
seq6 91.5 1e-13
>seq4
Length=4536433
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | || || ||| | |||||| | || |||||||
Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || ||| ||||| ||||| || || || || || || |||
Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| || | || | || ||||| ||||||||||| | ||| | |||||| |||
Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || ||||| ||| | |||||||| || |||||| | || ||
Sbjct 671259 ATCCAGAAGGAATCCACTCTTCATCTGGTACTCAGACTTCGTGGTGG 671213
>seq6
Length=1840879
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/229 (70%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704
||| ||||| |||||||| || || ||||| ||||||||| | || || ||||| | |||
Sbjct 490986 GTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCAT 490927
Query 119705 AAACTCGAAAGGATTT---GCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
|| ||| || || || ||| || |||||| | |||| ||| || |||
Sbjct 490926 GAAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTG---CCCAGGGCGAGCAGCAG 490870
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| | ||| | ||| | ||||| |||||||
Sbjct 490869 GCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTG-GCGTTCATTCCCAACAGGC 490811
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|||| || | ||||| ||| | ||| ||||| || ||| | || |||||
Sbjct 490810 CGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTC 490762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662178618640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |