Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq6 91.5 1e-13 >seq4 Length=4536433 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || ||| | |||||| | || ||||||| Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| ||||| ||||| || || || || || || ||| Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || ||||| ||||||||||| | ||| | |||||| ||| Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||| ||| | |||||||| || |||||| | || || Sbjct 671259 ATCCAGAAGGAATCCACTCTTCATCTGGTACTCAGACTTCGTGGTGG 671213 >seq6 Length=1840879 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| ||||| |||||||| || || ||||| ||||||||| | || || ||||| | ||| Sbjct 490986 GTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCAT 490927 Query 119705 AAACTCGAAAGGATTT---GCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 || ||| || || || ||| || |||||| | |||| ||| || ||| Sbjct 490926 GAAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTG---CCCAGGGCGAGCAGCAG 490870 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||| | ||| | ||||| ||||||| Sbjct 490869 GCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTG-GCGTTCATTCCCAACAGGC 490811 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 |||| || | ||||| ||| | ||| ||||| || ||| | || ||||| Sbjct 490810 CGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTC 490762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662178618640