Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 196 6e-45 >seq2 Length=8083196 Score = 196 bits (216), Expect = 6e-45 Identities = 744/1151 (65%), Gaps = 34/1151 (3%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || || ||||| || || || ||||||| || | | |||| | ||||| ||||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 | || || | ||| ||||| | ||| | || || ||||| ||||| ||||||||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 62931 |||||||| ||| |||| || ||||| || | ||||| || | ||| || | ||| | | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103 Query 62932 GACTCGAGCCTTTATTATAGATTTGT--ATCTCTT--TTCTCTTTCGTATAGTGTATACA 62987 || | ||||| || | | ||| | ||| | ||| | ||||| || | Sbjct 1633104 TTCT-GGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGA 1633158 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 | ||||||||||| || | |||| | || ||||| || | || || | | Sbjct 1633159 GTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGA 1633218 Query 63048 ACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63104 | ||| ||| | || |||| || || | ||| |||||||| || ||||||| | Sbjct 1633219 GTGTCCAGTCT---TGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGG 1633275 Query 63105 C-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63163 | || || || || | | ||| ||| || || || |||||| || | | Sbjct 1633276 CGTAGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAA 1633334 Query 63164 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63223 || | | | |||| ||||| ||||| | ||| ||||| | | | || || || ||| Sbjct 1633335 AAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTG 1633394 Query 63224 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63283 || || || || || | |||| |||||||| || |||| | || ||| ||||| | | Sbjct 1633395 TTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGA 1633454 Query 63284 CCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAA 63341 || ||||| ||||||||||| || | || || || | || || || | | | Sbjct 1633455 CCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCA 1633514 Query 63342 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 63401 ||| || || || || || || | || ||||| | || || || | || || | Sbjct 1633515 TTG--AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGT 1633572 Query 63402 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63461 |||| ||||| || ||||| ||| |||||| || | || || |||| |||| Sbjct 1633573 AGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTT 1633632 Query 63462 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTA 63521 || || || || || || | || || |||||||| ||||| || || | ||| | | Sbjct 1633633 GAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGA 1633692 Query 63522 GATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACA 63577 | |||||||||| |||||| || | ||| || | |||| || || | ||| Sbjct 1633693 GGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACA 1633748 Query 63578 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGA 63636 ||||| | ||| ||||| |||| ||| | | |||| ||| || || | || ||| || Sbjct 1633749 CGCATGAGCATATGCTGTGGTCGTTCCGC-AACTTGCTTGCCAATCTTGAGCAGGTATGA 1633807 Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63696 | |||||| || || || ||||| || | ||| |||||||| || || | |||| | Sbjct 1633808 TCTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGC 1633867 Query 63697 CGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT-GGTAATACTTGAAATAATAG 63755 |||||| || | || || ||| | || | || | ||| |||||| |||| Sbjct 1633868 CGAGTTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAG 1633926 Query 63756 GAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAA 63815 | | |||| || || ||||| ||||||| | | | ||| | ||| | | Sbjct 1633927 GGGAGGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGA 1633986 Query 63816 ATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCAT 63875 || | || || || | ||||| || || || || || || | || || || ||||| | Sbjct 1633987 ATTGCTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGT 1634046 Query 63876 AATCCGGATGT 63886 | || |||||| Sbjct 1634047 AGTCGGGATGT 1634057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631706945200