Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 8e-23
>seq4
Length=4536433
Score = 122 bits (134), Expect = 8e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| |||| || || | ||||| | ||||||||||| ||
Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| ||||| ||||| ||||| || |||||
Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAG-GACAAGGAAGGCATTCCCCCAGACCA 671093
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||||| | || ||||||||||| ||||| || |||| |||||| | || |||||
Sbjct 671092 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAA 671033
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||||| || || ||| || || || ||||| || ||
Sbjct 671032 CATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACT 670994
Score = 109 bits (120), Expect = 5e-19
Identities = 146/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| || |||| || |||| || || |||
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| || | || | ||| ||||| ||||| ||||| || ||
Sbjct 671607 GATACCATCGACAACGTCA---AATCCAAGATTCAA-GACAAGGAAGGCATTCCTCCCGA 671552
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||||| | || || ||||| || ||| | ||||| | ||||| || |||||||
Sbjct 671551 CCAGCAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTA 671492
Query 25175 CAATATTCAAAAAGAATCCAC 25195
||| || || |||||||||||
Sbjct 671491 CAACATCCAGAAAGAATCCAC 671471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327804596155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |