Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 2e-24
seq2 98.7 8e-16
>seq4
Length=4536433
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || ||| ||||| | |||||||| || |
Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| |||||||| || ||||| || || |||
Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 671092
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||||||||| || || |||||| |||||| | || || ||||||
Sbjct 671091 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAAC 671032
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || |||| | || || || || || | ||||| |||
Sbjct 671031 ATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCGCGGTGGT 670984
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| || || | || || || || ||| | | |
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | ||||| || |||||||||||||| || ||||| ||||| ||
Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || || | || || ||||||| | ||||||||||
Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAAC 671488
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || |||||||||||| | ||| | || | ||| | || || ||
Sbjct 671487 ATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGG 671441
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| ||||| |||| || || || ||| | |
Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | ||| || || ||||||||||||||||| ||||| || |||
Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || || ||||| || | || || ||| || | ||||| ||||||
Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 671259 ATCCAGAAGGAATCCAC 671243
>seq2
Length=8083196
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || | || ||||| || ||| ||| ||| || || ||| || ||||
Sbjct 3687922 ACCGGCAAGACCATTACACTTGAGGTCGAATCCAGCGACACTGTCGACAATGTCAAGTCT 3687863
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||| |||||||| || ||||| ||||||||||| | || || || || ||
Sbjct 3687862 AAGATCCAAGATAAGGAGGGCATCCCACCAGATCAACAACGGTTGATCTTCGCAGGAAAG 3687803
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| ||||||||| | || | ||||| || | |||||||| || || ||| | ||
Sbjct 3687802 CAATTAGAGGATGGTAGAACTCTTTCCGACTATGATATTCAAAAGGAGTCAACCCTGCAC 3687743
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| || | ||||||| || |||
Sbjct 3687742 CTTGTGCTTAGATTGCGAGGTGGT 3687719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727810728905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |