Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq2 98.7 8e-16 >seq4 Length=4536433 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || || ||| ||||| | |||||||| || | Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| |||||||| || ||||| || || ||| Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 671092 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||||||||| || || |||||| |||||| | || || |||||| Sbjct 671091 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAAC 671032 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||| | || || || || || | ||||| ||| Sbjct 671031 ATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCGCGGTGGT 670984 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| || || | || || || || ||| | | | Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | ||||| || |||||||||||||| || ||||| ||||| || Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || || | || || ||||||| | |||||||||| Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAAC 671488 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| | ||| | || | ||| | || || || Sbjct 671487 ATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGG 671441 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| ||||| |||| || || || ||| | | Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | ||| || || ||||||||||||||||| ||||| || ||| Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| || | || || ||| || | ||||| |||||| Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 671259 ATCCAGAAGGAATCCAC 671243 >seq2 Length=8083196 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || | || ||||| || ||| ||| ||| || || ||| || |||| Sbjct 3687922 ACCGGCAAGACCATTACACTTGAGGTCGAATCCAGCGACACTGTCGACAATGTCAAGTCT 3687863 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||| |||||||| || ||||| ||||||||||| | || || || || || Sbjct 3687862 AAGATCCAAGATAAGGAGGGCATCCCACCAGATCAACAACGGTTGATCTTCGCAGGAAAG 3687803 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || ||||||||| | || | ||||| || | |||||||| || || ||| | || Sbjct 3687802 CAATTAGAGGATGGTAGAACTCTTTCCGACTATGATATTCAAAAGGAGTCAACCCTGCAC 3687743 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | ||||||| || ||| Sbjct 3687742 CTTGTGCTTAGATTGCGAGGTGGT 3687719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727810728905