Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 100 6e-16 >seq2 Length=8083196 Score = 100 bits (110), Expect = 6e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 |||||||||| || || ||||| || || |||||| ||||| | ||| ||| || Sbjct 7863001 CTCACTCTCGTATGCGTGGTCTCTCCGGTGGCCAGCGTGTCAAGGTCGTCCTCGCCGCTT 7863060 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 || | |||||||| |||||| |||||||||||||||||||||||||||| || ||||| Sbjct 7863061 GCAC-GTGGCAACGACCTCACTTGATCGTTCTCGACGAGCCTACCAACTACCTCGACCGA 7863119 Query 280821 GA 280822 || Sbjct 7863120 GA 7863121 Score = 87.8 bits (96), Expect = 4e-12 Identities = 176/257 (68%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197 ||| || ||||| ||| || ||| || || | ||||||||| ||||| || || || | Sbjct 7862392 TCACCTTCCAGGTATCTCTGGGCTCTCGTATCGCTGTCATTGGTCCCAACGGCGCTGGCA 7862451 Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTT 280254 |||| || || |||| || |||| || ||| | || |||||| | || | Sbjct 7862452 AGTCGACGCTTGTCAACGTGTTGACCGGAGAGTTGATCCCCACCACTGGTGAA---GTCT 7862508 Query 280255 GGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGA 280314 ||||| ||||| || || || ||| || |||||||||||| ||||||||| | Sbjct 7862509 ACCAGCATGAGAACATCCGTATTGCCTACATCAAGCAGCACGCTTTCGCCCACATCGATA 7862568 Query 280315 ACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGAT 280373 |||| || |||| ||| || | |||||||| ||||| | | || | ||| ||||| Sbjct 7862569 ACCATCTCGACAAGACCCCCTCTGAGTACATTCAATGGCG-TTTCCAGACTGGCGAGGAT 7862627 Query 280374 CTGGAGTCGGTGGATCG 280390 | ||| | |||| || Sbjct 7862628 CGCGAGACCATGGACCG 7862644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836312741117