Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 6e-16
>seq2
Length=8083196
Score = 100 bits (110), Expect = 6e-16
Identities = 97/122 (80%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
|||||||||| || || ||||| || || |||||| ||||| | ||| ||| ||
Sbjct 7863001 CTCACTCTCGTATGCGTGGTCTCTCCGGTGGCCAGCGTGTCAAGGTCGTCCTCGCCGCTT 7863060
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|| | |||||||| |||||| |||||||||||||||||||||||||||| || |||||
Sbjct 7863061 GCAC-GTGGCAACGACCTCACTTGATCGTTCTCGACGAGCCTACCAACTACCTCGACCGA 7863119
Query 280821 GA 280822
||
Sbjct 7863120 GA 7863121
Score = 87.8 bits (96), Expect = 4e-12
Identities = 176/257 (68%), Gaps = 8/257 (3%)
Strand=Plus/Plus
Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197
||| || ||||| ||| || ||| || || | ||||||||| ||||| || || || |
Sbjct 7862392 TCACCTTCCAGGTATCTCTGGGCTCTCGTATCGCTGTCATTGGTCCCAACGGCGCTGGCA 7862451
Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTT 280254
|||| || || |||| || |||| || ||| | || |||||| | || |
Sbjct 7862452 AGTCGACGCTTGTCAACGTGTTGACCGGAGAGTTGATCCCCACCACTGGTGAA---GTCT 7862508
Query 280255 GGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGA 280314
||||| ||||| || || || ||| || |||||||||||| ||||||||| |
Sbjct 7862509 ACCAGCATGAGAACATCCGTATTGCCTACATCAAGCAGCACGCTTTCGCCCACATCGATA 7862568
Query 280315 ACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGAT 280373
|||| || |||| ||| || | |||||||| ||||| | | || | ||| |||||
Sbjct 7862569 ACCATCTCGACAAGACCCCCTCTGAGTACATTCAATGGCG-TTTCCAGACTGGCGAGGAT 7862627
Query 280374 CTGGAGTCGGTGGATCG 280390
| ||| | |||| ||
Sbjct 7862628 CGCGAGACCATGGACCG 7862644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836312741117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |